Marine Science Faculty Publications
Submissions from 2019
Predation on Oysters is Inhibited by Intense or Chronically Mild, Low Salinity Events, Timothy J. Pusack, David L. Kimbro, J. Wilson White, and Christopher D. Stallings
In Search of Red Noctiluca scintillans Blooms in the East China Sea, Lin Qi, Sheng-Fang Tsai, Yanlong Chen, Chengfeng Le, and Chuanmin Hu
Marine Oil Snow Sedimentation and Flocculent Accumulation (MOSSFA) Events: Learning from the Past to Predict the Future, Antonietta Quigg, Uta Passow, Kendra L. Daly, Adrian Burd, David Hollander, Patrick Schwing, and Kenneth Lee
Dataset for: Oil biodegradation: Interactions of artificial marine snow, clay particles, oil and Corexit, Shokouh Rahsepar
An Extreme Sea Level Indicator for the Contiguous United States Coastline, Md. Mamunur Rashid, Thomas Wahl, Don P. Chambers, Francisco M. Calafat, and William V. Sweet
Don't Throw the Fish out with the Respirometry Water, Matthew D. Regan, Milica Mandic, Rashpal S. Dhillon, Gigi Y. Lau, Anthony P. Farrell, Patricia M. Schulte, Brad A. Seibel, Ben Speers-Roesch, Gordon R. Ultsch, and Jeffrey G. Richards
Introduction to the Gulf of Mexico: Geologic History of the Gulf of Mexico, Delores M. Robinson and Brad E. Rosenheim
The impact of experimental oil-contaminated marine snow on meiofauna, Melissa Rohal and Paul Montagna
Midwater Acoustic Echosounding with the Wire Flyer Towed Profiling Vehicle, Christopher Roman, Joe Warren, Erik Cordes, and Brad A. Seibel
Hydrocarbon concentration data from sediment cores collected aboard R/V Justo Sierra cruise JS-0815 in the southern Gulf of Mexico from 2015-07-31 to 2015-08-08, Isabel C. Romero
Long-Term Preservation of Oil Spill Events in Sediments: The Case for the Deepwater Horizon Oil Spill in the Northern Gulf of Mexico, Isabel C. Romero, Jeff Chanton, Brad E. Roseheim, Jagoš R. Radović, Patrick Schwing, David Hollander, Stephen R. Larter, and Thomas B. P. Oldenburg
Prevalence of a vertically transmitted single-stranded DNA virus in spinybacked orbweavers (Gasteracantha cancriformis) from Florida, USA, Karyna Rosario, Kaitlin A. Mettel, Anthony M. Greco, and Mya Breitbart
Prevalence of a Vertically Transmitted Single-stranded DNA Virus in Spinybacked Orbweavers (Gasteracantha cancriformis) From Florida, USA, Karyna Rosario, Kaitlin Mettel, Anthony Greco, and Mya Breitbart
Novel Circular Rep-Encoding Single-Stranded DNA Viruses Detected in Treated Wastewater, Karyna Rosario, Christina M. Morrison, Kaitlin A. Mettel, and Walter Q. Betancourt
Survival and Recovery of the Foraminifer Amphistegina gibbosa and Associated Diatom Endosymbionts Following Up to 20 Months in Aphotic Conditions, Benjamin J. Ross and Pamela Hallock
Minimum Information About an Uncultivated Virus Genome (MIUViG), Simon Roux, Evelien Adriaenssens, Bas Dutilh, Eugene Koonin, Andrew Kropinski, Mart Krupovic, Mya Breitbart, and Karyna Rosario
Trace metals in sediment cores collected during the R/V Justo Sierra cruise and coastal sampling in the southern Gulf of Mexico from 2015-07-31 to 2016-08-10, A. C. Ruiz-Fernandez, L. H. Perez-Bernal, and J.A. Sanchez Cabeza
Mercury in Sediment Cores from the Southern Gulf of Mexico: Preindustrial Levels and Temporal Enrichment Trends, Ana Carolina Ruiz-Fernández, M. Rangel-García, L. H. Pérez-Bernal, P. G. López-Mendoza, Adolfo Gracia, Patrick Schwing, David Hollander, F. Páez-Osuna, J. G. Cardoso-Mohedano, T. Cuellar-Martinez, and J. A. Sanchez-Cabeza
An Ocean-Colour Time Series for Use in Climate Studies: The Experience of the Ocean-Colour Climate Change Initiative (OC-CCI), Shubha Sathyendranath, Robert J.W. Brewin, Carsten Brockmann, Vanda Brotas, Ben Calton, Andrei Chuprin, Paolo Cipollini, André B. Couto, James Dingle, Roland Doerffer, Craig Donlon, Mark Dowell, Alex Farman, Mike Grant, Steve Groom, Andrew Horseman, Thomas Jackson, Hajo Krasemann, Samantha Lavender, Victor Martinez-Vicente, Constant Mazeran, Frédéric Mélin, Timothy S. Moore, Dagmar Müller, Peter Regner, Shovonlal Roy, Chris J. Steele, François Steinmetz, John Swinton, Malcolm Taberner, Adam Thompson, André Valente, Marco Zühlke, Vittorio E. Brando, Hui Feng, Gene Feldman, Bryan A. Franz, Robert Frouin, Richard W. Gould, Stanford B. Hooker, Mati Kahru, Susanne Kratzer, B. Greg Mitchell, Frank E. Muller-Karger, Heidi M. Sosik, Kenneth J. Voss, Jeremy Werdell, and Trevor Platt
Assessing Eukaryotic Biodiversity in the Florida Keys National Marine Sanctuary Through Environmental DNA Metabarcoding, Natalie Sawaya, Anni Djurhuus, Collin Closek, Megan Hepner, Emily Olesin, Lindsey Visser, Christopher Kelble, Katherine Hubbard, and Mya Breitbart
A New 30 Meter Resolution Global Shoreline Vector and Associated Global Islands Database for the Development of Standardized Ecological Coastal Units, Roger Sayre, Suzanne Noble, Sharon Hamann, Rebecca Smith, Dawn Wright, Sean Breyer, Kevin Butler, Keith Van USA, Charlie Frye, Deniz Karagulle, Dabney USAHopkins, Drew Stephens, Kevin Kelly, Zeenatul Basher, Devon Burton, Jill Cress, Karina Atkins, D. Paco, Beverly Friesen, Rebecca Allee, Tom Allen, Peter Aniello, Irawan Asaad, Mark John, Kathy Goodin, Peter Harris, Maria Kavanaugh, Helen Lillis, Eleonora Lillis Lillis, Frank Muller-Karger, Bjorn Nyberg, Rost Parsons, Justin Saarinen, Jac Steiner, and Adam Reed
Droplet size distribution of large-scale turbulent oil-in-water jets, Michael Schlüter and Simeon Pesch
Laboratory observations of bubble nucleation in methane-saturated crude oil, Michael Schlüter and Simeon Pesch
Laboratory observations of the behavior of gas-saturated crude oil droplets rising in seawater, Michael Schlüter and Simeon Pesch
CTD data collected onboard R/V Weatherbird II cruise WB-0717 in the Gulf of Mexico from 2017-07-19 to 2017-07-30, Patrick Schwing
Environmental Setting, Stressors and Their Influence on Resilience of Benthic Fauna in the Gulf of Mexico, Patrick Schwing, Sarah Davies, Arne Diercks, Adrienne Correa, Isabel C. Romero, and Jason Sylvan
The Sedimentary Record of MOSSFA Events in the Gulf of Mexico: A Comparison of the Deepwater Horizon (2010) and Ixtoc 1 (1979) Oil Spills, Patrick Schwing, David Hollander, Gregg R. Brooks, Rebekka A. Larson, David W. Hastings, Jeffrey P. Chanton, Sara A. Lincoln, Jagoš R. Radović, and Alette Langenhoff
Impact and Resilience of Benthic Foraminifera in the Aftermath of the Deepwater Horizon and Ixtoc 1 Oil Spills, Patrick Schwing and Maria Luisa Machain-Castillo
Benthic Faunal Baselines in the Gulf of Mexico: A Precursor to Evaluate Future Impacts, Patrick Schwing, Paul A. Montagna, Maria Luisa Machain-Castillo, Elva Escobar-Briones, and Melissa Rohal
The Significance of Ocean Deoxygenation for Mesopelagic Communities, Brad A. Seibel and Karen F. Wishner
Automated Spectrophotometric Determination of Carbonate Ion Concentration in Seawater Using a Portable Syringe Pump Based Analyzer, Qipei Shangguan, Huilin Shu, Peicong Li, Kunning Lin, Robert H. Byrne, Quanlong Li, Dongxing Yuan, and Jian Ma
Carbonate Ion Concentrations in Seawater: Spectrophotometric Determination at Ambient Temperatures and Evaluation of Propagated Calculation Uncertainties, Jonathan D. Sharp and Robert H. Byrne
So What? A Brief History of Robert N. Ginsburg 1925-2017, Eugene A. Shinn
Physical and Biogeochemical Controls on the Distribution of Dissolved Cadmium and its Isotopes in the Southwest Pacific Ocean, M. Sieber, Tim M. Conway, G. F. de Souza, H. Obata, S. Takano, Y. Sohrin, and D. Vance
High-resolution Cd Isotope Systematics in Multiple Zones of the Southern Ocean from the Antarctic Circumnavigation Expedition, M. Sieber, T. M. Conway, G. F. de Souza, C. S. Hassler, M. J. Ellwood, and D. Vance
Developing High Resolution Baseline Coast Resource Maps Using World View 2 Imagery for a Coastal Village in Fiji, Ashneel Ajay Singh, Anish Maharaj, Michelle Kumar, Priyatma Singh, Sanjay Singh, Frank Muller-Karger, Matthew James Mccarthy, Lionel Joseph, Herve Damlamian, and Zulfikar Begg
The Effect of Ocean Warming on Black Sea Bass (Centropristis Striata) Aerobic Scope and Hypoxia Tolerance, Emily Slesinger, Alyssa Andres, Rachael Young, Brad Seibel, Vincent Saba, Beth Phelan, John Rosendale, Daniel Wieczorek, and Grace Saba
An Introduction to the ‘Oceans and Society: Blue Planet’ Initiative, Emily A. Smail, Paul M. DiGiacomo, Sophie Seeyave, Samy Djavidnia, Louis Celliers, Pierre-Yves Le Traon, Jeremy Gault, Elva Escobar-Briones, Hans-Peter Plag, Christine Pequignet, Lenore Bajona, Li Zhang, Jay Pearlman, Andy Steven, Jonathan Hodge, Marie-Fanny Racault, Curt Storlazzi, William Skirving, Ron Hoeke, John Marra, Ap van Dongeren, Frank Muller-Karger, Douglas Cripe, and Daniel Takaki
The Marine Geological Imprint of Antarctic Ice Shelves, James A. Smith, Alastair G. Graham, Alix L. Post, Claus-Dieter Hillenbrand, Philip J. Bart, and Ross D. Powell
Editorial: Oceanobs'19: An Ocean of Opportunity, Sabrina Speich, Tong Lee, Frank Muller-Karger, Laura Lorenzoni, Ananda Pascual, Di Jin, Eric Delory, Gilles Reverdin, John Siddorn, Marlon R. Lewis, Nuria Marba, Pier Luigi Buttigieg, Sanae Chiba, Justin Manley, Amos Tiereyangn Kabo-Bah, Kruti Desai, and Abby Ackerman
Hepatobiliary Analyses Suggest Chronic PAH Exposure in Hakes (Urophycis spp.) Following the Deepwater Horizon Oil Spill, Rachel E. Struch, Erin Pulster, Andrea D. Schreier, and Steven A. Murawski
The Challenges of Interpreting Oil–Water Spatial and Spectral Contrasts for the Estimation of Oil Thickness: Examples From Satellite and Airborne Measurements of the Deepwater Horizon Oil Spill, Shaojie Sun and Chuamin Hu
Hydrocarbon-degrading microbial communities are site-specific and their activity is limited by synergies in temperature and nutrient availability in surface ocean waters, Xiaoxu Sun and Joel Kostka
High-Resolution Trophic Models Reveal Structure and Function of a Northeast Pacific Ecosystem, Szymon Surma, Villy Christensen, Rajeev Kumar, Cameron H. Ainsworth, and Tony J. Pitcher
Associations Between Chronic Exposure to Polycyclic Aromatic Hydrocarbons and Health Indices in Gulf of Mexico Tilefish (Lopholatilus chamaeleonticeps) Post Deepwater Horizon, Susan M. Syder, Erin Pulster, and Steven Murawski
Pepper Mild Mottle Virus: Agricultural Menace Turned Effective Tool for Microbial Water Quality Monitoring and Assessing (Waste)water Treatment Technologies, Erin Symonds, Karyna Rosario, and Mya Breitbart
Southern Ocean Biogeochemical Float Deployment Strategy, With Example From the Greenwich Meridian Line (GO-SHIP A12), L. D. Talley, I. Rosso, I. Kamenkovich, M. R. Mazloff, J. Wang, E. Boss, A. R. Gray, K. S. Johnson, R. M. Key, S. C. Riser, N. L. Williams, and J. L. Sarmiento
Contributions of GRACE to Understanding Climate Change, Byron D. Tapley, Michael M. Watkins, Frank Flechtner, Christoph Reigber, Srinivas Bettadpur, Matthew Rodell, Ingo Sasgen, James S. Famiglietti, Felix W. Landerer, Don P. Chambers, John T. Reager, Alex S. Gardner, Himanshu Save, Erik R. Ivins, Sean C. Swenson, Carmen Boening, Christoph Dahle, David N. Wiese, Henryk Dobslaw, Mark E. Tamisiea, and Isabella Velicogna
Metagenomics characterization of red snapper microbiome following CEWAF and pathogen exposure, Andrea Tarnecki
Sea Level Variability and Change, P. R. Thompson, M. J. Widlansky, E. Leuliette, W. Sweet, D. P. Chambers, B. D. Hamlington, S. Jevrejeva, J. J. Mara, M. A. Merrifield, G. T. Mitchum, and R. S. Nerem
Western Gulf of Mexico red snapper sample collection data, 2018-02-18 to 2018-09-18, Tara Topping
Discovery of a novel potexvirus in the seagrass Thalassia testudinum from Tampa Bay, Florida, Noémi Van Bogaert, Karyna Rosario, Bradley Furman, Margaret Hall, Anthony Greco, and Mya Breitbart
Dataset for: Ecotoxicological benthic impacts of experimental oil-contaminated marine snow deposition, Justine S. van Eenennaam, Melissa Rohal, Jagos R. Radovic, Thomas B. Oldenburg, Isabel Romero, Albertinka J. Murk, and Edwin M. Foekema
Compositional and Beam-size-dependent Effects on Pressure Baseline in Clumped Isotope Mass Spectrometry, Ryan A. Venturelli and Brad E. Rosenheim
The great Atlantic Sargassum Belt, Mengqiu Wang, Chuanmin Hu, Brian B. Barnes, Gary Mitchum, Brian Lapointe, and Joseph P. Montoya
Material Transports, Robert H. Weisberg
The Coastal Ocean Circulation Influence on the 2018 West Florida Shelf K. brevis Red Tide Bloom, Robert H. Weisberg, Yonggang Liu, Chad Lembke, Chuanmin Hu, Katherine Hubbard, and Matthew Garrett
The Coastal Ocean Circulation Influence on the 2018 West Florida Shelf K. brevis Red Tide Bloom, Robert H. Weisburg, Yonggang Liu, Chad Lembke, Chuanmin M. Hu, Katherine Hubbard, and Mathew Garrett
CEWAF-exposed Florida pompano reproduction data for test ID-208: Spawn and Hatch & Reproductive Function Assays, Dana Wetzel
CEWAF-exposed Florida pompano reproduction: Lipid Class Composition, Dana Wetzel
Field Collected Red fish and Southern Flounder: tPAH tissue results, Dana Wetzel
Red drum CEWAF uptake/depuration study: Immune Function Assays & Gene Expression, Dana Wetzel
Red drum diet exposure to Deepwater Horizon crude oil contaminated feed: Gene Expression, Dana Wetzel
Sub-adult southern flounder exposure to crude oil-contaminated sediment: Immune Function Assays & Gene Expression, Dana Wetzel
Total Polycyclic Aromatic results for CEWAF and pathogen exposed Red Snapper, Dana Wetzel
RNA-seq transcriptome characterization of tissue from sub-adult southern flounder exposed to Louisiana crude oil contaminated sediment, Dana Wetzel, Tracy Sherwood, and Rebecca Medvecky
Total petroleum hydrocarbon results from sub-adult red drum exposure to chemically enhanced water accommodated fraction for 4 days uptake, 6 days duration, Dana Wetzel, Tracy Sherwood, Rebecca Medvecky, and Christelle Miller
Total polycyclic aromatic hydrocarbon results for CEWAF-exposed Florida pompano reproduction, Dana Wetzel, Tracy Sherwood, Rebecca Medvecky, and Christelle Miller
Total polycyclic aromatic hydrocarbon (TPAH) results: Chemically enhanced water-accommodated fractions (CEWAF)-exposed Florida pompano F1 Generation, Dana Wetzel, Tracy Sherwood, Rebecca Medvecky, and Christelle Miller
CEWAF water exposed Florida pompano F0 reproduction: Oxidative Stress Assays, Dana Wetzel, Tracy Sherwood, Christelle Miller, and Rebecca Medvecky
Red drum CEWAF uptake/depuration study: RNA-seq transcriptome characterization of tissue, Dana Wetzel, Tracy Sherwood, Christelle Miller, and Rebecca Medvecky
Sub-adult Southern flounder exposure to crude oil-contaminated sediment: Oxidative Stress Assays & DNA Damage Assays, Dana Wetzel, Tracy Sherwood, Christelle Miller, and Rebecca Medvecky
Red drum CEWAF uptake/depuration study: Oxidative Stress Assays & DNA Damage Assays, DL Wetzel, TA Sherwood, and RL Medvecky
Red drum diet exposure to Deepwater Horizon crude oil contaminated feed: Fish Growth, DL Wetzel, TA Sherwood, and RL Medvecky
CEWAF-exposed Florida pompano reproduction: Oxidative stress and DNA damage assays, DL Wetzel, TA Sherwood, CA Miller, and RL Medvecky
CEWAF-exposed Florida pompano reproduction: tPAH results, DL Wetzel, TA Sherwood, CA Miller, and RL Medvecky
CEWAF water exposed Florida pompano F0 reproduction: Lipid Class Composition, DL Wetzel, TA Sherwood, CA Miller, and RL Medvecky
Red drum CEWAF uptake/depuration study: Lipid Composition, DL Wetzel, TA Sherwood, CA Miller, and RL Medvecky
Red drum diet exposure to Deepwater Horizon crude oil contaminated feed: Oxidative Stress Assays, DL Wetzel, TA Sherwood, CA Miller, and RL Medvecky
Sub-adult Southern flounder exposure to crude oil-contaminated sediment: Lipid Composition and Fatty Acids, DL Wetzel, TA Sherwood, CA Miller, and RL Medvecky
CEWAF-exposed Florida pompano reproduction: Spawn and Hatch & Reproductive Function Assays, DL Wetzel, TA Sherwood, NR Rhody, MJ Resley, and RL Medvecky
Long-term Vegetation Changes in Four Types of Wetland in China and USA Between 2000 and 2011: Observations from MODIS, Kun Yu and Chuanmin Hu
Methane Increase over the Barents and Kara Seas after the Autumn Pycnocline Breakdown: Satellite Observations, Lenoid Yurganov, Frank Muller-Karger, and Ira Leifer
Dataset for: Effects of Oil Properties and Slick Thickness on Dispersant Field Effectiveness and Oil Fate, Marieke Zeinstra-Helfrich
Performance of POLYMER Atmospheric Correction of Ocean Color Imagery in the Presence of Absorbing Aerosols, Minwei Zhang, Chuanmin Hu, and Brian B. Barnes
Submesoscale and Mesoscale Eddies in the Florida Straits: Observations from Satellite Ocean Color Measurements, Yingjun Zhang, Chuanmin Hu, Yonggang Liu, Robert H. Weisberg, and Vassiliki H. Kourafalou
Eukaryotic Circular Rep-Encoding Single-Stranded DNA (CRESS DNA) Viruses: Ubiquitous Viruses with Small Genomes and a Diverse Host Range, Lele Zhao, Karyna Rosario, Mya Breitbart, and Siobain Duffy
Submissions from 2018
Evaluation of diet matrix uncertainty for the Atlantis model, Cameron Ainsworth
Input, output and complete run files for the Atlantis ecosystem model Deepwater Horizon oil spill simulations, Cameron Ainsworth
Impacts of the Deepwater Horizon Oil Spill Evaluated Using an End-to-End Ecosystem Model, Cameron Ainsworth, Claire B. Paris-Limouzy, Natalie Perlin, Lindsey N. Dornberger, William F. Patterson III, Emily Chancellor, Steven Murawski, David J. Hollander, Kendra L. Daly, Isabel Romero, Felicia Coleman, and Holly Perryman
Influence of River-Induced Fronts on Hydrocarbon Transport: A Multiplatform Observational Study, Yannis Androulidakis, Vassiliki Kourafalou, Tamay Özgökmen, Oscar Garcia-Pineda, Björn Lund, Matthieu Le Hénaff, Chuanmin Hu, Brian K. Haus, Guillaume Novelli, Cedric Guigand, HeeSook Kang, Lars Hole, and Jochen Horstmann
Differential Effects of Solid-phase Extraction Resins on the Measurement of Dissolved Lignin-phenols and Organic Matter Composition in Natural Waters, Ana R. Arellano, Thomas S. Bianchi, Jack A. Hutchings, Michael R. Shields, and Xingqian Cui
Hydrocarbon Degradation and Response of Seafloor Sediment Bacterial Community in the Northern Gulf of Mexico to Light Louisiana Sweet Crude Oil, Hernando P. Bacosa, Deana L. Erdner, Brad E. Rosenheim, Prateek Shetty, Kiley W. Seitz, Brett J. Baker, and Zhanfei Liu
Multi-band Spectral Matching Inversion Algorithm to Derive Water Column Properties in Optically Shallow Waters: An Optimization of Parameterization, Brian B. Barnes, Rodrigo Garcia, Chuanmin Hu, and Zhongping Lee
