This is a select list of works produced by the faculty of the USF College of Marine Science. Materials are included when two conditions are satisfied: 1) the creator approves inclusion and 2) the publisher allows the material to be placed in the repository. Please direct questions or requests to expand the list of materials to Jason Boczar.

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Submissions from 2017

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Development of a marine compatible biological assay for mutagenic compounds, Lauren McDaniel

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Fish Exposure Studies: Associated water, sediment and food microbiology and mutagenic potential, Lauren McDaniel

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Microalgae Bioproduction – Feeds, Foods, Nutraceuticals, and Polymers, Clifford R. Merz and Kevan L. Main

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Changes in Residence Time due to Large-Scale Infrastructure in a Coastal Plain Estuary, Steven D. Meyers, Amanda J. Moss, and Mark E. Luther

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Estimating Particulate Inorganic Carbon Concentrations of the Global Ocean From Ocean Color Measurements Using a Reflectance Difference Approach, C. Mitchell, C. Hu, B. Bowler, D. Drapeau, and W. M. Balch

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Sea Level Rise, Gary Mitchum, Andrea Dutton, Don P. Chambers, and Shimon Wdowinski

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Dynamics of Larger Benthic Foraminiferal Populations in the Upper Florida Keys Reef Tract, USA: Comparisons with other Coral Reef Bioindicators, Elizabeth F. Moses, Pamela Hallock, and John E. Fauth

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Projections of Future Habitat Use by Atlantic Bluefin Tuna: Mechanistic Vs. Correlative Distribution Models, B. A. Muhling, R. Brill, J. T. Lamkin, M. A. Roffer, S. K. Lee, Y. Liu, and Frank E. Muller-Karger

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Monitoring Biodiversity Change through Effective Global Coordination, Frank E. Muller-Karger

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Spectroscopy for Global Observation of Coastal and Inland Aquatic Habitats, Frank E. Muller-Karger

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A Globally Deployable Strategy for Co-Development of Adaptation Preferences to Sea-Level Rise: the Public Participation Case of Santos, Brazil, Frank E. Muller-Karger and Catherine J. Reynolds

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Megaregions Among the Large Marine Ecosystems of the Americas, Frank E. Muller-Karger, Digna Rueda-Roa, F. P. Chavez, M. T. Kavanaugh, and M. A. Roffer

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Response of Marginopora vertebralis (Foraminifera) from Laucala Bay, Fiji, to Changing Ocean pH, Roselyn Naidu, Pamela Hallock, Jonathan Erez, and Matakite Maata

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Monitoring Biodiversity Change through Effective Global Coordination, Laetitia M. Navarro, Néstor Fernández, Carlos Guerra, Rob Guralnick, W Daniel Kissling, Maria Cecilia Londoño, Frank Muller-Karger, Eren Turak, Patricia Balvanera, Mark J. Costello, Aurelie Delavaud, GY El Serafy, Simon Ferrier, Ilse Geijzendorffer, Gary N. Geller, Walter Jetz, Eun-Shik Kim, HyeJin Kim, Corinne S. Martin, Melodie A. McGeoch, Tuyeni H. Mwampamba, Jeanne L. Nel, Emily Nicholson, Nathalie Pettorelli, Michael E. Schaepman, Andrew Skidmore, Isabel Sousa Pinto, Sheila Vergara, Petteri Vihervaara, Haigen Xu, Tetsukazu Yahara, Mike Gill, and Henrique M. Pereira

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Improving Detection of Short-duration Fishing Behaviour in Vessel Tracks by Feature Engineering of Training Data, Shay O’Farrell, James N. Sanchirico, Iliana Chollett, Marcy Cockrell, Steven A. Murawski, Jordan T. Watson, Alan Haynie, Andrew Strelcheck, and Larry Perruso

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Assessment of Fe(III) and Eu(III) Complexation by Silicate in Aqueous Solutions, James T. Patten and Robert H. Byrne

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Remote Sensing of Bottom Pressure from GRACE Satellites, Cecilia Peralta-Ferriz, Felix W. Landerer, Don P. Chambers, Denis Volkov, and William Llovel

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Assessing Coral Reef Health in the North Ari Atoll (Maldives) Using the FoRAM Index, Chiara Pisapia, Pamela Hallock, and Silvia Spezzaferri

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Thoughts on Improving Innovation: What Are the Characteristics of Innovation and How Do We Cultivate Them?, Victor Poirier, Lyle H. Schwartz, David Eddy, Richard Berman, Selim Chacour, James Wynne, William Cavanaugh, Dean F. Martin, Robert Byrne, and Paul R. Sanberg

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Genome Sequence of Euphorbia mosaic virus from Passionfruit and Euphorbia heterophylla in Florida, J. E. Polston, M. A. Londoño, A. L. Cohen, M. Padilla-Rodriguez, K. Rosario, and Mya Breitbart

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Reef Building and Carbonate Production Modes in the West-Central Tethys during the Cenozoic, Luis Pomar, Juan I. Baceta, Pamela Hallock, Guillem Mateu-Vicens, and Daniela Basso

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Environmental Drivers of Benthic Communities and Habitat Heterogeneity on an East Antarctic Shelf, Alexandra L. Post, Caroline Lavoie, Eugene W. Domack, Amy Leventer, Amelia E. Shevenell, Alexander D. Fraser, and NBP 14-02 SCIENCE TEAM

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An Ice Sheet Model Validation Framework for the Greenland Ice Sheet, Stephen F. Price, Matthew J. Hoffman, Jennifer A. Bonin, Ian M. Howat, Thomas Neumann, Jack Saba, Irina Tezaur, Jeffrey Guerber, Don P. Chambers, Katherine J. Evans, Joseph H. Kennedy, Jan Lenaerts, William H. Lipscomb, Mauro Perego, Andrew G. Salinger, Raymond S. Tuminaro, Michiel R. van den Broeke, and Sophie M. Nowicki

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Species Specific Metabolic Capacity of Naphthalene and Phenanthrene in Three Species of Marine Teleosts Exposed to Deepwater Horizon Crude Oil, Erin Pulster

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Species-Specific Metabolism of Naphthalene and Phenanthrene in 3 Species of Marine Teleosts Exposed to Deepwater Horizon Crude Oil, Erin Pulster, Kevan Main, Dana Wetzel, and Steven Murawski

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VIIRS Captures Phytoplankton Vertical Migration in the NE Gulf of Mexico, Lin Qi, Chuanmin Hu, Brian B. Barnes, and Zhongping Lee

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Floating Algae Blooms in the East China Sea, Lin Qi, Chuanmin Hu, Mengqiu Wang, Shaoling Shang, and Cara Wilson

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Requirement of Minimal Signal-to-noise Ratios of Ocean Color Sensors and Uncertainties of Ocean Color Products, Lin Qi, Zhongping Lee, Chuanmin Hu, and Menghua Wang

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Interpreting the Role of Ph on Stable Isotopes in Large Benthic Foraminifera, L. L. Robbins, P. O. Knorr, J. G. Wynn, Pamela Hallock, and P. J. Harries

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Time series of northern Gulf of Mexico hydrocarbon data, 2010-2013, Isabel C. Romero

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Large-Scale Deposition of Weathered Oil in the Gulf of Mexico Following a Deep-Water Oil Spill, Isabel Romero, Gerardo Toro-Farmer, Arne R. Diercks, Patrick Schwing, Frank E. Muller-Karger, Steven Murawski, and David Hollander

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Virus Discovery in All Three Major Lineages of Terrestrial Arthropods Highlights the Diversity of Single-stranded DNA Viruses Associated with Invertebrates, Karyna Rosario, Kaitlin Mettel, Bayleigh Benner, Ryan Johnson, Catherine Scott, Sohath Yusseff-Vanegas, Christopher Baker, Deby Cassill, Caroline Storer, Arvind Varsani, and Mya Breitbart

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Spatial Variability of Spanish Sardine (Sardinella Aurita) Abundance as Related to the Upwelling Cycle Off the Southeastern Caribbean Sea, Digna Rueda-Roa, Jeremy Mendoza, Frank E. Muller-Karger, Juan José Cárdenas, Alina Achury, and Yrene Astor

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The Acceleration of Dissolved Cobalt's Ecological Stoichiometry due to Biological Uptake, Remineralization, and Scavenging in the Atlantic Ocean, Mak A. Saito, Abagail E. Noble, Nicholas Hawco, Benjamin S. Twining, Daniel C. Ohnemus, Seth G. John, Phoebe Lam, Tim M. Conway, Rod Johnson, Dawn Moran, and Matthew McIlvin

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Justo Sierra Cruise Sample Data, southern Gulf of Mexico, 2015, Patrick Schwing

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Northern Gulf of Mexico Benthic and Planktic Foraminifera Taxonomy, 2011-2015, Patrick Schwing

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Northern Gulf of Mexico Pb-210 Inventories, 2010-2013, Patrick Schwing

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Weatherbird II Sediment Cruise Sample Data 2015, Patrick Schwing

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Constraining the Spatial Extent of Marine Oil Snow Sedimentation and Flocculent Accumulation Following the Deepwater Horizon Event Using an Excess 210Pb Flux Approach, Patrick Schwing, Greg Brooks, Rebecca Larson, C. W. Holmes, Bryan J. O'Malley, and David Hollander

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Cruises R/V Endeavor (EN505) and R/V Weatherbird II (WB1205) Gulf of Mexico Water Chemistry (Spring 2012), Patrick Schwing and Jeff Chanton

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Gulf of Mexico Benthic and Planktic Foraminifera Carbon Isotopes, 2015, Patrick Schwing and Jeff Chanton

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Impacts and Recovery of Benthic Marine Environments in the Aftermath of the DWH Event, Patrick Schwing, David Hollander, Paul Montagna, and Peter Santschi

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Weatherbird II Sediment Cruise Sample Data (2016), Patrick Schwing and Steven Murawski

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Characterizing the Variability of Benthic Foraminifera in the Northeastern Gulf of Mexico following the Deepwater Horizon Event (2010-2012), Patrick Schwing, Bryan J. O'Malley, Isabel C. Romero, M Martínez-Colón, D. W. Hastings, M. A. Glabach, E. M. Hladky, Anthony M. Greco, and David Hollander

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Sensing an Intense Phytoplankton Bloom in the Western Taiwan Strait from Radiometric Measurements on a UAV, Shaoling Shang, Zhongping Lee, Gong Lin, Chuanmin Hu, Lianghai Shi, Yongnian Zhang, Xueding Li, Jingyu Wu, and Jing Yan

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Spectrophotometric Determination of Carbonate Ion Concentrations: Elimination of Instrument-Dependent Offsets and Calculation of In Situ Saturation States, Jonathan D. Sharp, Robert H. Byrne, Xuewu Liu, Richard A. Feely, Erin E. Cuyler, Rik Wanninkhof, and Simone R. Alin

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Virus Taxonomy in the Age of Metagenomics, Peter Simmonds, Mike Adams, Mária Benkő, Mya Breitbart, J. Rodney Brister, and Eric Carstens

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Europium Silicate Complexation at 25 °C and 0.7 Molar Ionic Strength, Alan L. Soli and Robert H. Byrne

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Southward Flow on the Western Flank of the Florida Current, Alexander V. Soloviev, Amy Hirons, Christopher Maingot, Cayla W. Dean, Richard E. Dodge, Alexander E. Yankovsky, Jon Wood, Robert H. Weisberg, Mark E. Luther, and Julian P. McCreary

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Characterization of Karenia Brevis Blooms on the West Florida Shelf Using Ocean Color Satellite Imagery: Implications for Bloom Maintenance and Evolution, I. M. Soto, Frank E. Muller-Karger, Chuanmin Hu, and J. Wolny

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The Periodic Topography of Ice Stream Beds: Insights from the Fourier Spectra of Mega-scale Glacial Lineations, Matteo Spagnolo, Timothy C. Bartholomaus, Chris D. Clark, Chris R. Stokes, Nigel Atkinson, Julian A. Dowdeswell, Jeremy C. Ely, Alastair G. C. Graham, Kelly A. Hogan, Edward C. King, Robert D. Larter, Stephen J. Livingstone, and Hamish D. Pritchard

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Biodiversity Effects of the Predation Gauntlet, Adrian C. Stier, Christopher D. Stallings, Jameal F. Samhouri, Mark A. Albins, and Glenn R. Almany

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Copper Toxicity Response Influences Mesotrophic Synechococcus Community Structure, Rhona K. Stuart, Randelle Bundy, Kristen N. Buck, Majid Ghassemain, Kathy Barbeau, and Brian Palenik

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Reef Calcifiers Are Adapted to Episodic Heat Stress but Vulnerable to Sustained Warming, Marleen Stuhr, Claire E. Reymond, Vera Rieder, Pamela Hallock, Jörg Rahnenführer, Hildegard Westphal, and Michal Kucera

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Sub-ice Shelf Sediment Geochronology Utilizing Novel Radiocarbon Methodology for Highly Detrital Sediments, C. Subt, H. I. Yoon, K. C. Yoo, J. I. Lee, A. Leventer, Eugene W. Domack, and Brad E. Rosenheim

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Remote-Sensing Estimation of Phytoplankton Size Classes From GOCI Satellite Measurements in Bohai Sea and Yellow Sea, Deyong Sun, Yu Huan, Zhongfeng Qiu, Chuanmin Hu, Shengqiang Wang, and Yijun He

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Deepwater Horizon incident oil slick morphology determined from United States Geological Survey oil volume product, May 17 2010, Shaojie Sun

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Ixtoc-I oil spill footprints derived from Coastal Zone Color Scanner and Landsat/MSS imagery, Shaojie Sun

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Sun glint critical angle oil detection, Shaojie Sun

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Trophodynamic Effects of Climate Change-induced Alterations to Primary Production along the Western Antarctic Peninsula, Paul Mark Suprenand and Cameron H. Ainsworth

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Microbial Source Tracking in Shellfish Harvesting Waters in the Gulf of Nicoya, Costa Rica, Erin M. Symonds, Suzanne Young, M. E. Verbyla, S. M. McQuaig-Ulrich, E. Ross, Juan Jimenez, Valerie J. Harwood, and Mya Breitbart

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The Integral Role of Iron in Ocean Biogeochemistry, Alessandro Tagliabue, Andrew R. Bowie, Philip W. Boyd, Kristen N. Buck, Kenneth S. Johnson, and Mak A. Saito

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Echosounder for Biological Surveys Using Ocean Gliders, J. Christopher Taylor and Chad Lembke

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Sea Level Variability and Change, P. R. Thompson, M. A. Merrifield, E. Leuliette, W. Sweet, D. P. Chambers, B. D. Hamlington, S. Jevrejeva, J. J. Mara, G. T. Mitchum, and R. S. Nerem

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Life-history Studies by Non-lethal Sampling: Using Microchemical Constituents of Fin Rays as Chronological Recorders, O. E. Tzadik, E. B. Peebles, and C. D. Stallings

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Chemical Archives in Fishes Beyond Otoliths: A Review on the Use of Other Body Parts as Chronological Recorders of Microchemical Constituents for Expanding Interpretations of Environmental, Ecological, and Life-history Changes, Orian E. Tzadik, Joseph S. Curtis, Jennifer E. Granneman, Benjamin N. Kurth, Timothy J. Pusack, Amy A. Wallace, David J. Hollander, Ernst B. Peebles, and Christopher D. Stallings

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The Effects of Spatial Scale on Assigning Nursery Habitats in Atlantic Goliath Groupers (Epinephelus Itajara) Using Non-lethal Analyses of Fin Rays, Orian E. Tzadik, David L. Jones, Ernst B. Peebles, Christopher C. Koenig, and Christopher D. Stallings

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Differential Habitat Use of Reef Fishes on a Shelf-edge Reef off La Parguera, Puerto Rico, Orian E. Tzadik, Joshua P. Kilborn, and Richard Appeldoorn

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Short Organic Carbon Turnover Time and Narrow 14C Age Spectra in Early Holocene wetland Paleosols, Lael Vetter, Brad E. Rosenheim, Alvaro Fernandez, and Torbjörn E. Törnqvist

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Stable and Radiocarbon Isotopic Composition of Dissolved Organic Matter in the Gulf of Mexico, B. D. Walker, E. R. M. Druffel, J. Kolasinski, B. J. Roberts, X. Xu, and B. E. Rosenheim

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Mapping the Soundscape Off the SoutheasternUSA by Using Passive Acoustic Glider Technology, Carrie C. Wall, David A. Mann, Chad Lembke, Chris Taylor, Ruoying He, and Todd Kellison

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More Surprises in the Global Greenhouse: Human Health Impacts from Recent Toxic Marine Aerosol Formations, Due to Centennial Alterations of World-Wide Coastal Food Webs, John J. Walsh, Jason M. Lenes, Robert H. Weisberg, Lianyuan Zheng, Chuanmin Hu, Kent A. Fanning Ph.D., R. Snyder, and J. Smith

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Variability of Tropical Cyclone Rapid Intensification in the North Atlantic and Its Relationship with Climate Variations, Chunzai Wang, Xidong Wang, Robert H. Weisberg, and Michael L. Black

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Dataset for: Sun glint requirement for the remote detection of surface oil films, Mengqiu Wang

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Oil extraction Visible Infrared Imaging Radiometer Suite (VIIRS) Imagery, Western Gulf of Mexico 2005-2013, Mengqiu Wang

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Predicting Sargassum Blooms in the Caribbean Sea from MODIS Observations, Mengqiu Wang and Chuanmin Hu

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Photophysiological Tolerance of Algal Symbionts of Archaias Angulatus to Temperature Extremes, Heidi M. K. Waters and Pamela Hallock

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On the Loop Current Penetration into the Gulf of Mexico, Robert H. Weisberg and Yonggang Liu

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On the Movement of Deepwater Horizon Oil to Northern Gulf Beaches, Robert H. Weisberg, Lianyuan Zheng, and Yonggang Liu

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Calculating Surface Ocean pCO2 from Biogeochemical Argo Floats Equipped with pH: An Uncertainty Analysis, N. L. Williams, L. W. Juranek, R. A. Feely, K. S. Johnson, J. L. Sarmiento, L. D. Talley, A. G. Dickson, A. R. Gray, R. Wanninkhof, J. L. Russell, S. C. Riser, and Y. Takeshita

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Evolving Academic Culture to Meet Societal Needs, Kateryna Wowk, Larry McKinney, Frank E. Muller-Karger, Russell Moll, Susan Avery, Elva Escobar-Briones, David Yoskowitz, and Richard McLaughlin

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Atmospheric Correction of Hyperspectral Airborne GCAS Measurements Over the Louisiana Shelf Using a Cloud Shadow Approach, Minwei Zhang, Chuanmin Hu, Matthew G. Kowalewski, Scott J. Janz, Zhongping Lee, and Jianwei Wei

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Challenges in Methane Column Retrievals from AVIRIS-NG Imagery Over Spectrally Cluttered Surfaces: A Sensitivity Analysis, Minwei Zhang, Ira Leifer, and Chuanmin Hu

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Permafrost Organic Carbon Mobilization From the Watershed to the Colville River Delta: Evidence From 14C Ramped Pyrolysis and Lignin Biomarkers, Xiaowen Zhang, Thomas S. Bianchi, Xingqian Cui, Brad E. Rosenheim, Chien-Lu Ping, Andrea J. M. Hanna, Mikhail Kanevskiy, Kathryn M. Schreiner, and Mead A. Allison

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Importance of Lateral Flux and Its Percolation Depth on Organic Carbon Export in Arctic Tundra Soil: Implications from a Soil Leaching Experiment, Xiaowen Zhang, Jack A. Hutchings, Thomas S. Bianchi, Yina Liu, Ana Arellano, and Edward A. Schuur

Submissions from 2016

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Distributions and Accumulation Rates of Polycyclic Aromatic Hydrocarbons in the Northern Gulf of Mexico Sediments, Puspa L. Adhikari, Kanchan Maiti, Edward B. Overton, Brad E. Rosenheim, and Brian D. Marx

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Development of a Portable Carbon System Sensor for Ocean Acidification Research, Lori Adornato, Eric Kaltenbacher, Robert H. Byrne, Xuewu Liu, and Jonathan Sharp

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Temporal Variability of Reactive Iron Over the Gulf of Alaska Shelf, Ana M. Aguilar-Islas, Marie J.M. Séguret, Robert Rember, Kristen N. Buck, Peter Proctor, Calvin W. Mordy, and Nancy B. Kachel

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Marginal beta probability density functions for predator-prey diet linkages for the Gulf of Mexico fitted using maximum likelihood method, April 2013-May 2015, Cameron Ainsworth

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Predator-prey diet linkages with error range for the Gulf of Mexico fitted using maximum likelihood method, April 2013- May 2015, Cameron Ainsworth

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Predator-prey diet linkages with error range for the Gulf of Mexico fitted using maximum likelihood method, Cameron H. Ainsworth

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Towable Instrumentation for Use with a Hand-Deployed Remotely Operated Vehicle, Laughlin D. L. Barker, Stacy L. Kim, Benjamin T. Saenz, D. J. Osborne, and Kendra L. Daly

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Dependence of Satellite Ocean Color Data Products on Viewing Angles: A Comparison Between SeaWiFS, MODIS, and VIIRS, Brian B. Barnes and Chuanmin Hu

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Island building in the South China Sea: detection of turbidity plumes and artificial islands using Landsat and MODIS data, Brian B. Barnes and Chuanmin Hu

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Toxicity and Mutagenicity of the Gulf of Mexico Waters during and after the Deepwater Horizon oil spill, July 2010 to August 2012, Jonelle Basso

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Trimethylamine Oxide Accumulation as a Function of Depth in Hawaiian Mid-water Fishes, Abigail B. Bockus and Brad A. Seibel

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The Ferrojan Horse Hypothesis: Iron-Virus Interactions in the Ocean, Chelsea Bonnain, Mya Breitbart, and Kristen N. Buck

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Biogeochemical Cycling of Organic Iron-binding Ligands: Insights From GEOTRACES Data in the Atlantic Ocean, Kristen N. Buck, Chelsea Bonnain, and Randelle Bundy

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An Intercomparison of Dissolved Iron Speciation at the Bermuda Atlantic Time-series Study (BATS) Site: Results from GEOTRACES Crossover Station A, Kristen N. Buck, Loes J. A. Gerringa, and Micha J. A. Rijkenberg

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A Compilation of Iron Speciation Data for Open Oceanic Waters, Salvatore Caprara, Kristen N. Buck, Loes J. A. Gerringa, Micha J. A. Rijkenberg, and Damiano Monticelli