Green Archiving For USF Faculty: Getting Started

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  3. Attach your CV and send the email to: scholarcommons@usf.edu

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Submissions from 2020

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The Activity of Sulfono-γ-AApeptide Helical Foldamers that Mimic GLP-1, Peng Sang, Zhihong Zhou, Yan Shi, Candy Lee, Zaid Amso, David Huang, Timothy Odom, Vân T.B. Nguyen-Tran, Weijun Shen, and Jianfeng Cai

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A Meta-analysis Reveals Temperature, Dose, Life Stage, and Taxonomy Influence Host Susceptibility to a Fungal Parasite, Erin L. Sauer, Jeremy M. Cohen, Marc J. Lajeunesse, Taegan A. McMahon, David J. Civitello, Sarah A. Knutie, Karena Nguyen, Elizabeth A. Roznik, Brittany F. Sears, Scott Bessler, Bryan K. Delius, Neal Halstead, Nicole Ortega, Matthew D. Venesky, Suzanne Young, and Jason R. Rohr

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Calling: Earth #027 - Michelle Saunders, Geographer, Michelle Saunders

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Manage Your Data: Information Management Strategies for DH Practitioners, Kristen Schuster and Vanessa Reyes

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A Synthesis of Deep Benthic Faunal Impacts and Resilience Following the Deepwater Horizon Oil Spill, Patrick T. Schwing, Paul A. Montagna, Samantha B. Joye, Claire B. Paris, Erik E. Cordes, Craig R. McClain, Joshua P. Kilborn, and Steven A. Murawski

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Ubiquity and Functional Uniformity in CO2 Concentrating Mechanisms in Multiple Phyla of Bacteria is Suggested by a Diversity and Prevalence of Genes Encoding Candidate Dissolved Inorganic Carbon Transporters, Kathleen Scott, Tara L. Harmer, Bradford Gemmell, Andrew M. Kramer, Markus Sutter, Cheryl A. Kerfeld, Kourtney S. Barber, Saaurav Bari, Joshua W. Boling, Cassandra P. Campbell, Javier F. Gallard-Gongora, Jessica K. Jackson, Aldo Lobos, Jeannie M. Mounger, Peter W. Radulovic, Jacqueline M. Sanson, Sarah Schmid, Candice Takieddine, Kiley F. Warlick, and Robert Whittaker

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Anomalous δ13C in Particulate Organic Carbon at the Chemoautotrophy Maximum in the Cariaco Basin, Mary I. Scranton, Gordon T. Taylor, Robert C. Thunell, Frank E. Muller-Karger, Yrene Astor, Peter Swart, Virginia P. Edgcomb, and Maria G. Pachiadaki

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Oxygen Supply Capacity in Animals Evolves to Meet Maximum Demand at the Current Oxygen Partial Pressure Regardless of Size or Temperature, Brad A. Seibel and Curtis Deutsch

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Calling: Earth #025 - Nicole Seiden, Environmental Scientist, Nicole Seiden

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Perceptions of Hurricane Track Forecasts in the U.S.A, Jason Senkbeil, Jacob Reed, Jennifer M. Collins, Kimberly Brothers, Michelle Saunders, Walker Skeeter, Emily Cerrito, Saurav Chakraborty, and Amy Polen

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Cliff Feature Delineation Tool and Baseline Builder Tool, Version 1.0 User Guide, Alexander C. Seymour, Cheryl J. Hapke, and Jonathan Warrick

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Insights into the Bioavailability of Oceanic Dissolved Fe from Phytoplankton Uptake Kinetics, Yeala Shaked, Kristen N. Buck, Travis Mellett, and Maria. T. Maldonado

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Interpreting Measurements of Total Alkalinity in Marine and Estuarine Waters in the Presence of Proton-binding Organic Matter, Jonathan D. Sharp and Robert H. Byrne

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Scientist of the week!, Sarah L. Sheffield, Lisette Melendez, Kristin Houdyshell, and Mathew Burgos

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Paleoceanography: Lessons for a Changing World, Amelia Shevenell, Peggy Delaney, Katrin Meissner, Laurie Menviel, and Alan C. Mix

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Transmission of West Nile and Five Other Temperate Mosquito-borne Viruses Peaks at Temperatures Between 23°C and 26°C, Marta S. Shocket, Anna B. Verwillow, Mailo G. Numazu, Hani Slamani, Jeremy M. Cohen, Fadoua El Moustaid, Jason Rohr, Leah R. Johnson, and Erin A. Mordecai

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Structural studies of magnetic C60/Cu multilayers, J. E. Shoup, D. A. Arena, J. A. Borchers, B. J. Kirby, A. J. Caruana, C. J. Kinane, S. Langridge, M. Rogers, and O. Cespedes

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Cycling of Zinc and Its Isotopes across Multiple Zones of the Southern Ocean: Insights from the Antarctic Circumnavigation Expedition, M. Sieber, T. M. Conway, G. F. de Souza, C. S. Hassler, M. J. Ellwood, and D. Vance

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Examining the Statistical Relationships between Volcanic Seismic, Infrasound, and Electrical Signals: A Case Study of Sakurajima Volcano, 2015, Cassandra M. Smith, Glenn Thompson, Steven Reader, Sonja A. Behnke, Stephen R. McNutt, Ron Thomas, and Harald Edens

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Tanshinone IIA Inhibits Epithelial-to-mesenchymal Transition Through Regulating β-arrestin1 Mediated β-catenin Signaling Pathway in Colorectal Cancer, Qing Song, Liu Yang, Zhifen Han, Xinnan Wu, Ruixiao Li, Lihong Zhou, Ningning Liu, Hua Sui, Jianfeng Cai, Yan Wang, Qing Ji, and Qi Li

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Early Efficacy of Multitiered Dual-Language Instruction: Promoting Preschoolers’ Spanish and English Oral Language, Trina D. Spencer, Meghan Moran, Marilyn S. Thompson, Douglas B. Petersen, and M. Adelaida Restrepo

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Photic Stress on Coral Reefs in the Maldives: The Amphistegina Bleaching Index, Stephanie Stainbank, Silvia Spezzaferri, Valentina Beccari, Pamela Hallock, Arthur Adams, Auriele Angeloz, Daniela Basso, Annalisa Caragnano, Nicolo Del Piero, and Patrick Dietsche

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Geoscience Videos and Animations: How to Make Them with Your Students, and How to Use Them in the Classroom, Robert J. Stern, Jeff Ryan, Ning Wang, Victor J. Ricchezza, and Siloa Willis

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Cop Killers and the Death Penalty: an Exploratory Mixed Methods Analysis, North Carolina (1977–2009), Bernadette Stewart, John K. Cochran, M. Dwayne Smith, Beth Bjerregaard, and Sondra Fogel

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Mixed Rational-Exponential Solutions to the Kadomtsev-Petviashvili-II Equation with a Self-Consistent Source, Dan Su, Wen-Xiu Ma, Xuelin Yong, and Yehui Huang

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Distorting Science, putting Water at Risk, S. Mažeika Patricio Sullivan, Mark Rains, Amanda D. Rodewald, William W. Buzbee, and Amy D. Rosemond

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miR146a-mediated Targeting of FANCM during Inflammation Compromises Genome Integrity, Devakumar Sundaravinayagam, Hye Rim Kim, TingTing Wu, Hyun Hee Kim, Semo Jun, Jeong-Heon Cha, Younghoon Kee, Ho Jin You, and Jung-Hee Lee

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Preparing for The Inevitable: Ecological and Indigenous Community Impacts of Oil Spill-Related Mortality in The United States’ Arctic Marine Ecosystem, Paul M. Suprenand, Carie Hoover, Cameron H. Ainsworth, Lindsey N. Dornberger, and Chris J. Johnson

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Evidence-based Health Solutions for Challenges Women Face during Pandemics like COVID-19: A Systematic Review Protocol, Zhaohui Su, Shelly Wagers, Emme Lopez, Lori Ann Terjesen, Jaffar Abbas, Feng Shi, Caifeng Wang, and Yuyang Cai

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Prediction of Chronic Disease-Related Inpatient Prolonged Length of Stay Using Machine Learning Algorithms, Hasan Symum and José Zayas-Castro

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On the Price of Satisficing in Network User Equilibria, Mahdi Takalloo and Changhyun Kwon

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Sicily Before the Greeks. The Interaction with Aegean and the Levant in the Pre-colonial Era, Davide Tanasi

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Boosting Computational Effectiveness in Big Spatial Flow Data Analysis with Intelligent Data Reduction, Ran Tao, Zhaoya Gong, Qiwei Ma, and Jean-Claude Thill

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BiFlowLISA: Measuring Spatial Association for Bivariate Flow Data, Ran Tao and Jean-Claude Thill

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Cornus Officinalis Promotes IGFBP2 and Autophagy in Human 1.1B4 Pancreatic Cell Line as Revealed by Employing a Global Proteomic Approach via Mass Spectrometry, Arielle Elizabeth Tawfik, Jennifer Guergues, Stanley M. Stevens Jr, and Brant Roger Burkhardt

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The Folding Propensity of α/Sulfono-γ-AA Peptidic Foldamers with Both Left- and Right-Handedness, Peng Teng, Mengmeng Zheng, Darrell Cerrato, Yan Shi, Mi Zhou, Songyi Xue, Wei Jiang, Lukasz Wojtas, Li-June Ming, Yong Hu, and Jianfeng Cai

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Capturing Resilience in Context: Development and Validation of a Situational Judgment Test of Resilience, Yuejia Teng, Michael T. Brannick, and Walter C. Borman

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Capturing, Preserving, and Digitizing Legacy Seismic Data from the Montserrat Volcano Observatory Analog Seismic Network, July 1995–December 2004, Glenn Thompson, John A. Power, Jochen Braunmiller, Andrew B. Lockhart, Lloyd Lynch, Wendy McCausland, Charlotte A. Rowe, Thomas Shea, Randall A. White, and Charles I. Breithaupt

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N-Amino Peptide Scanning Reveals Inhibitors of Aβ42 Aggregation, Khalilia C. Tillett and Juan R. Valle

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Population Genomics of Three Deep-sea Cephalopod Species Reveals Connectivity Between the Gulf of Mexico and Northwestern Atlantic Ocean, L. E. Timm, H. D. Bracken-Grissom, A. Sosnowski, M. Breitbart, M. Vecchione, and H. Judkins

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First Genome Sequence of the Gunnison’s Prairie Dog (Cynomys gunnisoni), a Keystone Species and Player in the Transmission of Sylvatic Plague, Mirian T. N. Tsuchiya, Rebecca B. Dikow, and Loren Cassin-Sackett

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Democracy, Liberalism, and Discretion: The Political Puzzle of the Administrative State, Stephen Turner

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Explaining Away Crime: The Race Narrative in American Sociology and Ethical Theory, Stephen Turner

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Freud in Many Contexts, Stephen Turner

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Habit Is Thus the Enormous Flywheel of Society: Pragmatism. Social Theory, and Cognitive Science, Stephen Turner

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Relativism in the Social Sciences, Stephen Turner

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The Stone in the Shoe: Weber Today, Stephen Turner

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The Autonomy and Integrity of Science, Stephen Turner and Daryl E. Chubin

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What are Democratic Values? A Neo-Kelsenian Approach, Stephen Turner and George Mazur

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The Changing Temptations of Science, Stephen P. Turner and Daryl E. Chubin

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Quantifying Rates of “Rifting while Drifting” in the Southern Gulf of California: The role of the Southern Baja California Microplate and its Eastern Boundary Zone, Paul J. Umhoefer, C. Plattner, and Rocco Malservisi

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Tuberculosis Clinical Presentation and Treatment Outcomes in Pregnancy: a Prospective Cohort Study, Brittney J. van de Water, Meredith B. Brooks, Chuan-Chin Huang, Letizia Trevisi, Leonid Lecca, Carmen Contreras, Jerome Galea, Roger Calderon, Rosa Yataco, Megan Murray, and Mercedes C. Becerra

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Morphodynamic Modelling of the Wilderness Breach, Fire Island, New York. Part I: Model set-up and Validation, Maarten van Ormondt, Timothy R. Nelson, Cheryl J. Hapke, and Dano Roelvink

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Early Life History Growth in Fish Reflects Consumption-mortality Tradeoffs, Kelly Vasbinder and Cameron Ainsworth

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Monitoring the Fate of Injected CO2 using Geodetic Techniques, Donald W. Vasco, Timothy H. Dixon, Alessandro Ferretti, and Sergey V. Samsonov

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Spawning Origins and Ontogenetic Movements for Demersal Fishes: An Approach Using Eye-lens Stable Isotopes, Julie L. Vecchio and Ernst B. Peebles

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The Discursive Construction of The Gamification of Journalism, Tim P. Voss and Gregory P. Perreault

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Introducing Seven Transition Metal Ions into Terpyridine-Based Supramolecules: Self-Assembly and Dynamic Ligand Exchange Study, Lei Wang, Bo Song, Sandra Khalife, Yiming Li, Li-June Ming, Shi Bai, Yaping Xu, Hao Yu, Ming Wang, Heng Wang, and Xiaopeng Li

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Self-Assembly of Metallo-Supramolecules under Kinetic or Thermodynamic Control: Characterization of Positional Isomers Using Scanning Tunneling Spectroscopy, Lei Wang, Bo Song, Yiming Li, Lele Gong, Xin Jiang, Ming Wang, Shuai Lu, Xin-Qi Hao, Zhenhai Xia, Yuan Zhang, Saw Wai Hla, and Xiaopeng Li

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Morphological and Sedimentological Impacts of Hurricane Michael along the Northwest Florida Coast, Ping Wang, Jacob D. Adam, Jun Cheng, and Mathieu Vallée

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Metal–Organic Frameworks for Enzyme Immobilization: Beyond Host Matrix Materials, Xiaoliang Wang, Pui Ching Lan, and Shengqian Ma

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Beyond Confined Catalysis in Porous Materials, Xiaoliang Wang, Pui Ching Lan, Sai Wang, and Shengqian Ma

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Future Vision for Autonomous Ocean Observations, Christopher Whitt, Jay Pearlman, Brian Polagye, Frank Caimi, Frank Muller-Karger, Andrea Copping, Heather Spence, Shyam Madhusudhana, William Kirkwood, Ludovic Grosjean, Bilal Muhammad Fiaz, Satinder Singh, Sikandra Singh, Dana Manalang, Ananya Sen Gupta, Alain Maguer, Justin J. H. Buck, Andreas Marouchos, Malayath Aravindakshan Atmanand, Ramasamy Venkatesan, Vedachalam Narayanaswamy, Pierre Testor, Elizabeth Douglas, Sebastien de Halleux, and Siri Jodha Khalsa

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Improved Description of Ligand Polarization Enhances Transferability of Ion–ligand Interactions, Vered Wineman-Fisher, Yasmine Al-Hamdani, Péter R. Nagy, Alexandre Tkatchenko, and Sameer Varma

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Improved Description of Ligand Polarization Enhances Transferability of Ion–ligand Interactions, Vered Wineman-Fisher, Yasmine Al-Hamdani, Péter R. Nagy, Alexandre Tkatchenko, and Sameer Varma

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Transferable Interactions of Li+ and Mg2+ Ions in Polarizable Models, Vered Wineman-Fisher, Julián Meléndez Delgado, Péter R. Nagy, Eric Jakobsson, Sagar A. Pandit, and Sameer Varma

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Ocean Deoxygenation and Copepods: Coping with Oxygen Minimum Zone Variability, Karen F. Wishner, Brad Seibel, and Dawn Outram

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Factors Affecting the 2019 Atlantic Hurricane Season and the Role of the Indian Ocean Dipole, Kimberly M. Wood, Philip J. Klotzbach, Jennifer M. Collins, Louis-Philippe Caron, Ryan E. Truchelut, and Carl J. Schreck

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Symmetry Breaking Soliton, Breather, and Lump Solutions of a Nonlocal Kadomtsev–Petviashvili System, Hong-Yu Wu, Jin-Xi Fei, Zheng-Yi Ma, Jun-Chao Chen, and Wen-Xiu Ma

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Biogenic Silica and Organic Carbon Records in Zhoushan Coastal Sea over the Past One Hundred Years and Their Environmental Indications, Hao Xu, Shangwei Jiang, Jialin Li, Ruiliang Pu, Jia Wang, Wanghai Jin, Longbin Sha, and Dongling Li

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Elizabeth Ann Seton, Cassandra L. Yacovazzi

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Katharine Drexel, Cassandra L. Yacovazzi

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Relationship Between Obesity-Induced Metabolic Abnormalities and Nutrient Intake: Sex Differences in Japanese University Students, Mayumi Yamamoto, Mausam Mehta, Akihiro Nishio, Ryo Horita, and Ricardo Izurieta

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Highly efficient electrocatalytic hydrogen evolution promoted by O–Mo–C interfaces of ultrafine β-Mo2C nanostructures, Hui Yang, Xing Chen, Guoxiang Hu, Wan-Ting Chen, Siobhan J. Bradley, Weijie Zhang, Gaurav Verma, Thomas Nann, De-en Jiang, Paul E. Kruger, Xiangke Wang, He Tian, Geoffrey I. N. Waterhouse, Shane G. Telfer, and Shengqian Ma

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Giant, Unconventional Anomalous Hall Effect in the Metallic Frustrated Magnet Candidate, KV3Sb5, Shuo-Ying Yang, Yaojia Wang, Brenden R. Ortiz, Defa Liu, Jacob Gayles, Elena Derunova, Rafael Gonzalez-Hernandez, Libor Šmejkal, Yulin Chen, Stuart S. P. Parkin, Stephen D. Wilson, Eric S. Toberer, Tyrel McQueen, and Mazhar N. Ali

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Genome Sequence of Vibrio natriegens Phage vB_VnaS-AQKL99, Noah Yonas, Paige Boleman, Y Nguyen, Makenzie Kerr, Kema Malki, Anthony M. Greco, and Mya Breitbart

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Genome Sequence of Vibrio natriegens Phage vB_VnaS-AQKL99, Noah Yonas, Paige Boleman, Y Nguyen, Makenzie Kerr, Kema Malki, Anthony M. Greco, and Mya Breitbart

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A Preliminary Exploration of the Cooling Effect of Tree Shade in Urban Landscapes, Qiuyan Yu, Wenjie Ji, Ruiliang Pu, Shawn Landry, Michael Acheampong, Jarlath O'Neil-Dunne, Zhibin Ren, and Shakhawat H. Tanim

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Lump Solutions of a Nonlinear PDE Combining with a New Fourth-Order Term, Liqin Zhang, Wen-Xiu Ma, and Yehui Huang

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Evaluation of Remote Sensing Reflectance Derived From the Sentinel-2 Multispectral Instrument Observations Using POLYMER Atmospheric Correction, Minwei Zhang and Chuanmin Hu

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Phylogeny of Terrestrial Isopods Based on the Complete Mitochondrial Genomes, Subvert the Monophyly of Oniscidea, Rui Zhang, Ruru Chen, Jianmei An, and Carlos A. Santamaria

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Emissive Platinum(II) Cages with Reverse Fluorescence Resonance Energy Transfer for Multiple Sensing, Zeyuan Zhang, Zhengqing Zhao, Lianwei Wu, Shuai Lu, Sanliang Ling, Guoping Li, Letian Xu, Lingzhi Ma, Yali Hou, Xingchen Wang, Xiaopeng Li, Gang He, Kai Wang, Bo Zou, and Mingming Zhang

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Spontaneous Formation of Sub-4 nm Nanocrystalline Alloy Via Polymorphic Phase Transformation, Ying Zhong, Chunqing Wang, Jin Wang, Huiwen Ma, Sriram Krishnamoorthy, Vladislav Paley, Zijian Weng, and Sungho Jin

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Estimating Road Network Accessibility during a Hurricane Evacuation: A Case Study of Hurricane Irma in Florida, Yi-Jie Zhu, Yujie Hu, and Jennifer M. Collins

Submissions from 2019

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Teaching Mathematics through Concept Motivation and Action Learning, Sergei Abramovich, Arcadii Z. Grinshpan, and David L. Milligan

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Self-Assembled Fluorescent Pt(II) Metallacycles as Artificial Light-Harvesting Systems, Koushik Acharyya, Soumalya Bhattacharyya, Hajar Sepehrpour, Shubhadip Chakraborty, Shuai Lu, Bingbing Shi, Xiaopeng Li, Partha Sarathi Mukherjee, and Peter J. Stang

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The Calling of Social Thought: Rediscovering the Work of Edward Shils, Christopher Adair-Toteff and Stephen Turner

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Effects of Menthol Flavor Cigarettes or Total Urinary Menthol on Biomarkers of Nicotine and Carcinogenic Exposure and Behavioral Measures, Karen Ahijevych, Laura A. Szalacha, and Alai Tan

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The Lamplighter Group of Rank Two Generated by a Bireversible Automaton, Elsayed Ahmed and Dmytro Savchuk

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Vitamin D Status and Risk of Incident Tuberculosis Disease: A Nested Case-Control study, Systematic Review, and Individual-Participant Data Meta-Analysis, Omowunmi Aibana, Chuan-Chin Huang, Said Aboud, Alberto Arnedo-Pena, Mercedes C. Becerra, Juan B. Bellido-Blasco, Ramesh Bhosale, Roger Calderon, Silvia Chiang, and Jerome Galea

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Geography, Environmental Resources and African Development, Fenda A. Akiwumi and William C. Barnett

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Applicability of Combined GPR and Gradiometer to Detect Buried Shallow Targets for Near-Surface Investigations, Iftekhar Alam, William Piwonka, James Atkins, and Joseph E. Panzik

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Modeling an Intrusion Detection System Based on Adaptive Immunology, Vishwa Alaparthy and Salvatore D. Morgera

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New Exact Solutions of Nonlinear (3 + 1)-Dimensional Boiti-Leon-Manna-Pempinelli Equation, Mohamed R. Ali and Wen-Xiu Ma

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Solution of Nonlinear Volterra Integral Equations with Weakly Singular Kernel by Using the HOBW Method, Mohamed R. Ali, Mohamed M. Mousa, and Wen-Xiu Ma

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A New Exact Algorithm to Optimize a Linear Function over the Set of Efficient Solutions for Biobjective Mixed Integer Linear Programs, Alvaro Sierra Altamiranda and Hadi Charkhgard

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Complexity of Work and Incident Cognitive Impairment in Puerto Rican Older Adults, Ross Andel, Ana Luisa Dávila-Roman, Catherine Grotz, Brent J. Small, Kyriakos S. Markides, and Michael Crowe

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Improved Learning from Data Competitions through Strategic Design of Training and Test Data Sets, Christine M. Anderson-Cook, Lu Lu, Kary L. Myers, Kevin R. Quinlan, and Norma Pawley

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Rejoinder, Christine M. Anderson-Cook, Lu Lu, and Peter Parker

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Effective Interdisciplinary Collaboration Between Statisticians and Other Subject Matter Experts, Christine M. Anderson-Cook, Lu Lu, and Peter A. Parker