Green Archiving For USF Faculty: Getting Started

  1. Update your CV to include all work completed since arriving at USF.
  2. Write a short email giving us permission to post your research. We will seek copyright permission to post the digital item(s).
  3. Attach your CV and send the email to: scholarcommons@usf.edu

      It's that easy!

If you would like to self-submit your scholarly works you can submit content here.

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Submissions from 2020

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Summary of Progress on Major Research Issues: Deep-Sea Oil Spills, Steven A. Murawski, Cameron H. Ainsworth, Sherryl Gilbert, David J. Hollander, Claire B. Paris, Michael Schlüter, and Dana L. Wetzel

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Summary of Contemporary Research on the Use of Chemical Dispersants for Deep-Sea Oil Spills, Steven A. Murawski, Michael Schlüter, Claire B. Paris, and Zachary M. Aman

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Deepwater Oil and Gas Production in the Gulf of Mexico and Related Global Trends, Steven Murawski, David Hollander, Sherryl Gilbert, and Adolfo Gracia

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A Predictive Strategy for Mapping Locations Where Future MOSSFA Events Are Expected, Albertinka Murk, David Hollander, Shuangling Chen, Chuanmin Hu, Yongxue Liu, Sophie Vonk, Patrick Schwing, Sherryl Gilbert, and Edwin Foekema

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Simulating Trade-offs Between Socio-economic and Conservation Objectives for Lake Victoria (East Africa) Using Multispecies, Multifleet Ecosystem Models, Vianny Natugonza, Cameron Ainsworth, Erla Sturludóttir, Laban Musinguzi, Richard Ogutu-Ohwayo, Tumi Tomasson, Chrisphine Nyamweya, and Gunnar Stefansson

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Ecosystem Modelling of Data-limited Fisheries: How Reliable are Ecopath with Ecosim Models without Historical Time Series Fitting?, Vianny Natugonza, Cameron Ainsworth, Erla Sturludóttir, Laban Musinguzi, Richard Ogutu Ohwayo, Tumi Tomasson, Chrisphine Nyamweya, and Gunnar Stefansson

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A Hydrologic Landscapes Perspective on Groundwater Connectivity of Depressional Wetlands, Brian P. Neff, Donald O. Rosenberry, Scott G. Leibowitz, Dave M. Mushet, Heather E. Golden, Mark C. Rains, J. R. Brooks, and Charles R. Lane

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Enhanced Solar Photothermal Effect of PANi Fabrics with Plasmonic Nanostructures, Do T. Nga, Anh D. Phan, Vu D. Lam, Lilia M. Woods, and Katsunori Wakabayashi

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Uncovering Host-microbiome Interactions in Global Systems with Collaborative Programming: A Novel Approach Integrating Social and Data Sciences [version 1; peer review: awaiting peer review], Jenna Oberstaller, Swamy Rakesh Adapa, Guy Dayhoff II, Justin Gibbons, and Gregory S. Herbert

Silently Rising, Bogdan P. Onac

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Late Holocene Droughts and Cave Ice Harvesting by Ancestral Puebloans, Bogdan P. Onac, Steven M. Baumann, Dylan S. Parmenter, Eric Weaver, and Tiberiu B. Sava

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Caves and Karst, Bogdan P. Onac and Philip van Beynen

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The Effect of Behavioral Skills Training on Shot Performance in Field Hockey, Kelsey O'Neill and Raymond Miltenberger

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Two-Scale Network Dynamic Model for Energy Commodity Processes, Olusegun M. Otunuga and Gangaram Ladde

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Three Decades Later… Evolution of Immigrant Incorporation Policies in Portugal: A New Reading, Beatriz Padilla and Thais França

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Calling: Earth #036 - Joseph Panzik, Paleomagnetist, Joseph Panzik

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Connectivity of the Gulf of Mexico Continental Shelf Fish Populations and Implications of Simulated Oil Spills, Claire B. Paris, Steven A. Murawski, Maria Josefina Olascoaga, Ana C. Vaz, Igal Berenshtein, Philippe Miron, and Francisco Javier Beron-Vera

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Molecular Tools for Coral Reef Restoration: Beyond Biomarker Discovery, John Everett Parkinson, Andrew C. Baker, Iliana B. Baums, Sarah W. Davies, Andréa G. Grottoli, Sheila A. Kitchen, Mikhail V. Matz, Margaret W. Miller, Andrew A. Shantz, and Carly D. Kenkel

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Calling: Earth #032 - Matthew Pasek, Planetary Scientist, Matthew Pasek

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Serpentinization as a Route to Liberating Phosphorus on Habitable Worlds, Matthew Pasek, Arthur Omran, Carolyn Lang, Maheen Gull, Josh Abbatiello, Tian Feng, Lyle Garong, and Heather Abbott-Lyon

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Transforming From the Classroom to an Online Nursing Educator: A Transformative Learning Experience for New Online Nursing Faculty, Denise Passmore

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Combining Isoscapes with Tissue-Specific Isotope Records to Recreate the Geographic Histories of Fish, Ernst B. Peebles and David J. Hollander

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A Revised Diet Matrix to Improve the Parameterization of a West Florida Shelf Ecopath Model for Understanding Harmful Algal Bloom Impacts, Holly A. Perryman, Joseph H. Tarnecki, Arnaud Grüss, Elizabeth A. Babcock, Skyler R. Sagarese, Cameron H. Ainsworth, and Alisha M. Gray DiLeone

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Random Attractor for Stochastic Hindmarsh-Rose Equations with Multiplicative Noise, Chi Phan

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Chronology of Young Basalt Flows from Lava Tube Gypsum U-series Ages, Victor J. Polyak, Julian R. Dillon, Yemane Asmerom, and Bogdan P. Onac

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Foraminifera as Bioindicators of Water Quality: The FoRAM Index Revisited, Martina Prazeres, Michael Martinez-Colon, and Pamela Hallock

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Mapping Urban Tree Species by Integrating Multi-seasonal High Resolution Pléiades Satellite Imagery with Airborne LiDAR Data, Ruiliang Pu and Shawn M. Landry

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In Search of Floating Algae and Other Organisms in Global Oceans and Lakes, Lin Qi, Chuanmin Hu, Karlis Mikelsons, Menghua Wang, Veronica Lance, Shaojie Sun, Brian B. Barnes, Jun Zhao, and Close Dimitry Van der Zande

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A Precise Polyrotaxane Synthesizer, Yunyan Qiu, Bo Song, Cristian Pezzato, Dengke Shen, Wenqi Liu, Long Zhang, Yuanning Feng, Qing-Hui Guo, Kang Cai, Weixingyue Li, Hongliang Chen, Minh T. Nguyen, Yi Shi, Chuyang Cheng, R. Dean Astumian, Xiaopeng Li, and J. Fraser Stoddart

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Evaluating the Evidence Base for Evidence-based Instructional Practices in Chemistry through Meta-analysis, Tawabur Rahman and Scott E. Lewis

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Calling: Earth #035 - Mark Rains, Chair of the USF School of Geosciences, Mark Rains

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Parent-led, Stepped-care Cognitive-behavioral Therapy for Youth with Autism and Co-occurring Anxiety: Study Rationale and Method, Ana C. Ramirez, Stacey C. Grebe, Morgan M. McNeel, Danica L. Limon, Sophie C. Schneider, Leandra N. Berry, Robin P. Goin-Kochel, Sandra L. Cepeda, Robert G. Voigt, Alison Salloum, and Eric A. Storch

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C‑Jun and FOXO1 Mediate the Expression of Oncogenic PKC‑ι in Human Prostate Cancer Cells with an Interplay Between NF‑κB, IL‑8 and ICAM‑1, Wishrawana S. Ratnayake, Christopher A. Apostolatos, Sloan Breedy, and Mildred Acevedo-Duncan

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Fuzzy Epistemology: Decolonizing the Social Sciences, Bernd Reiter

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Digital Citizenship in a Datafied Society, Vanessa Reyes

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Saving Your Digital Past, Present, and Future: A Step-by-Step Guide, Vanessa Reyes

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Low Doses of Bisphenol S Affect Post-translational Modifications of Sperm Proteins in Male Mice, Hedvika Řimnáčová, Miriam Štiavnická, Jiří Moravec, Marouane Chemek, Yaroslav Kolinko, Olga García-Álvarez, Peter R. Mouton, Azalia Mariel Carranza Trejo, Tereza Fenclová, Nikola Eretová, Petr Hošek, Pavel Klein, Milena Králíčková, Jaroslav Petr, and Jan Nevoral

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Examining the Meaning of Vague Quantifiers in Higher Education: How Often is “Often”?, Louis M. Rocconi, Amber D. Dumford, and Breanna Butler

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Calling: Earth #041- Mel Rodgers, Volcanologist, Mel Rodgers

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The Effect of the Deepwater Horizon Oil Spill on Two Ecosystem Services in the Northern Gulf of Mexico, Melissa Rohal, Cameron Ainsworth, Brach Lupher, Paul A. Montagna, Claire B. Paris, Natalie Perlin, Paul Mark Suprenand, and David Yoskowitz

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Adherence to Behavioral Treatments and Parent Stress in Families of Children with ASD, Aimee K. Rovane, Robert M. Hock, and Stacy-Ann A. January

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HONEM: Learning Embedding for Higher Order Networks, Mandana Saebi, Giovanni Luca Ciampaglia, Lance M. Kaplan, and Nitesh V. Chawla

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Drivers of Concentrated Predation in an Antarctic Marginal-ice-zone Food Web, Benjamin T. Saenz, David G. Ainley, Kendra L. Daly, Grant Ballard, Erin Conlisk, Megan L. Elrod, and Stacy L. Kim

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The Activity of Sulfono-γ-AApeptide Helical Foldamers that Mimic GLP-1, Peng Sang, Zhihong Zhou, Yan Shi, Candy Lee, Zaid Amso, David Huang, Timothy Odom, Vân T.B. Nguyen-Tran, Weijun Shen, and Jianfeng Cai

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A Meta-analysis Reveals Temperature, Dose, Life Stage, and Taxonomy Influence Host Susceptibility to a Fungal Parasite, Erin L. Sauer, Jeremy M. Cohen, Marc J. Lajeunesse, Taegan A. McMahon, David J. Civitello, Sarah A. Knutie, Karena Nguyen, Elizabeth A. Roznik, Brittany F. Sears, Scott Bessler, Bryan K. Delius, Neal Halstead, Nicole Ortega, Matthew D. Venesky, Suzanne Young, and Jason R. Rohr

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Calling: Earth #027 - Michelle Saunders, Geographer, Michelle Saunders

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Manage Your Data: Information Management Strategies for DH Practitioners, Kristen Schuster and Vanessa Reyes

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A Synthesis of Deep Benthic Faunal Impacts and Resilience Following the Deepwater Horizon Oil Spill, Patrick T. Schwing, Paul A. Montagna, Samantha B. Joye, Claire B. Paris, Erik E. Cordes, Craig R. McClain, Joshua P. Kilborn, and Steven A. Murawski

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Ubiquity and Functional Uniformity in CO2 Concentrating Mechanisms in Multiple Phyla of Bacteria is Suggested by a Diversity and Prevalence of Genes Encoding Candidate Dissolved Inorganic Carbon Transporters, Kathleen Scott, Tara L. Harmer, Bradford Gemmell, Andrew M. Kramer, Markus Sutter, Cheryl A. Kerfeld, Kourtney S. Barber, Saaurav Bari, Joshua W. Boling, Cassandra P. Campbell, Javier F. Gallard-Gongora, Jessica K. Jackson, Aldo Lobos, Jeannie M. Mounger, Peter W. Radulovic, Jacqueline M. Sanson, Sarah Schmid, Candice Takieddine, Kiley F. Warlick, and Robert Whittaker

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Anomalous δ13C in Particulate Organic Carbon at the Chemoautotrophy Maximum in the Cariaco Basin, Mary I. Scranton, Gordon T. Taylor, Robert C. Thunell, Frank E. Muller-Karger, Yrene Astor, Peter Swart, Virginia P. Edgcomb, and Maria G. Pachiadaki

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Oxygen Supply Capacity in Animals Evolves to Meet Maximum Demand at the Current Oxygen Partial Pressure Regardless of Size or Temperature, Brad A. Seibel and Curtis Deutsch

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Calling: Earth #025 - Nicole Seiden, Environmental Scientist, Nicole Seiden

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Perceptions of Hurricane Track Forecasts in the U.S.A, Jason Senkbeil, Jacob Reed, Jennifer M. Collins, Kimberly Brothers, Michelle Saunders, Walker Skeeter, Emily Cerrito, Saurav Chakraborty, and Amy Polen

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Cliff Feature Delineation Tool and Baseline Builder Tool, Version 1.0 User Guide, Alexander C. Seymour, Cheryl J. Hapke, and Jonathan Warrick

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Insights into the Bioavailability of Oceanic Dissolved Fe from Phytoplankton Uptake Kinetics, Yeala Shaked, Kristen N. Buck, Travis Mellett, and Maria. T. Maldonado

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Interpreting Measurements of Total Alkalinity in Marine and Estuarine Waters in the Presence of Proton-binding Organic Matter, Jonathan D. Sharp and Robert H. Byrne

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Scientist of the week!, Sarah L. Sheffield, Lisette Melendez, Kristin Houdyshell, and Mathew Burgos

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Paleoceanography: Lessons for a Changing World, Amelia Shevenell, Peggy Delaney, Katrin Meissner, Laurie Menviel, and Alan C. Mix

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Transmission of West Nile and Five Other Temperate Mosquito-borne Viruses Peaks at Temperatures Between 23°C and 26°C, Marta S. Shocket, Anna B. Verwillow, Mailo G. Numazu, Hani Slamani, Jeremy M. Cohen, Fadoua El Moustaid, Jason Rohr, Leah R. Johnson, and Erin A. Mordecai

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Structural studies of magnetic C60/Cu multilayers, J. E. Shoup, D. A. Arena, J. A. Borchers, B. J. Kirby, A. J. Caruana, C. J. Kinane, S. Langridge, M. Rogers, and O. Cespedes

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Cycling of Zinc and Its Isotopes across Multiple Zones of the Southern Ocean: Insights from the Antarctic Circumnavigation Expedition, M. Sieber, T. M. Conway, G. F. de Souza, C. S. Hassler, M. J. Ellwood, and D. Vance

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Examining the Statistical Relationships between Volcanic Seismic, Infrasound, and Electrical Signals: A Case Study of Sakurajima Volcano, 2015, Cassandra M. Smith, Glenn Thompson, Steven Reader, Sonja A. Behnke, Stephen R. McNutt, Ron Thomas, and Harald Edens

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Tanshinone IIA Inhibits Epithelial-to-mesenchymal Transition Through Regulating β-arrestin1 Mediated β-catenin Signaling Pathway in Colorectal Cancer, Qing Song, Liu Yang, Zhifen Han, Xinnan Wu, Ruixiao Li, Lihong Zhou, Ningning Liu, Hua Sui, Jianfeng Cai, Yan Wang, Qing Ji, and Qi Li

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Early Efficacy of Multitiered Dual-Language Instruction: Promoting Preschoolers’ Spanish and English Oral Language, Trina D. Spencer, Meghan Moran, Marilyn S. Thompson, Douglas B. Petersen, and M. Adelaida Restrepo

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Photic Stress on Coral Reefs in the Maldives: The Amphistegina Bleaching Index, Stephanie Stainbank, Silvia Spezzaferri, Valentina Beccari, Pamela Hallock, Arthur Adams, Auriele Angeloz, Daniela Basso, Annalisa Caragnano, Nicolo Del Piero, and Patrick Dietsche

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Geoscience Videos and Animations: How to Make Them with Your Students, and How to Use Them in the Classroom, Robert J. Stern, Jeff Ryan, Ning Wang, Victor J. Ricchezza, and Siloa Willis

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Cop Killers and the Death Penalty: an Exploratory Mixed Methods Analysis, North Carolina (1977–2009), Bernadette Stewart, John K. Cochran, M. Dwayne Smith, Beth Bjerregaard, and Sondra Fogel

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Mixed Rational-Exponential Solutions to the Kadomtsev-Petviashvili-II Equation with a Self-Consistent Source, Dan Su, Wen-Xiu Ma, Xuelin Yong, and Yehui Huang

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Distorting Science, putting Water at Risk, S. Mažeika Patricio Sullivan, Mark Rains, Amanda D. Rodewald, William W. Buzbee, and Amy D. Rosemond

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miR146a-mediated Targeting of FANCM during Inflammation Compromises Genome Integrity, Devakumar Sundaravinayagam, Hye Rim Kim, TingTing Wu, Hyun Hee Kim, Semo Jun, Jeong-Heon Cha, Younghoon Kee, Ho Jin You, and Jung-Hee Lee

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Preparing for The Inevitable: Ecological and Indigenous Community Impacts of Oil Spill-Related Mortality in The United States’ Arctic Marine Ecosystem, Paul M. Suprenand, Carie Hoover, Cameron H. Ainsworth, Lindsey N. Dornberger, and Chris J. Johnson

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Evidence-based Health Solutions for Challenges Women Face during Pandemics like COVID-19: A Systematic Review Protocol, Zhaohui Su, Shelly Wagers, Emme Lopez, Lori Ann Terjesen, Jaffar Abbas, Feng Shi, Caifeng Wang, and Yuyang Cai

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Prediction of Chronic Disease-Related Inpatient Prolonged Length of Stay Using Machine Learning Algorithms, Hasan Symum and José Zayas-Castro

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On the Price of Satisficing in Network User Equilibria, Mahdi Takalloo and Changhyun Kwon

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Sicily Before the Greeks. The Interaction with Aegean and the Levant in the Pre-colonial Era, Davide Tanasi

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Boosting Computational Effectiveness in Big Spatial Flow Data Analysis with Intelligent Data Reduction, Ran Tao, Zhaoya Gong, Qiwei Ma, and Jean-Claude Thill

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BiFlowLISA: Measuring Spatial Association for Bivariate Flow Data, Ran Tao and Jean-Claude Thill

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Cornus Officinalis Promotes IGFBP2 and Autophagy in Human 1.1B4 Pancreatic Cell Line as Revealed by Employing a Global Proteomic Approach via Mass Spectrometry, Arielle Elizabeth Tawfik, Jennifer Guergues, Stanley M. Stevens Jr, and Brant Roger Burkhardt

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The Folding Propensity of α/Sulfono-γ-AA Peptidic Foldamers with Both Left- and Right-Handedness, Peng Teng, Mengmeng Zheng, Darrell Cerrato, Yan Shi, Mi Zhou, Songyi Xue, Wei Jiang, Lukasz Wojtas, Li-June Ming, Yong Hu, and Jianfeng Cai

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Capturing Resilience in Context: Development and Validation of a Situational Judgment Test of Resilience, Yuejia Teng, Michael T. Brannick, and Walter C. Borman

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Capturing, Preserving, and Digitizing Legacy Seismic Data from the Montserrat Volcano Observatory Analog Seismic Network, July 1995–December 2004, Glenn Thompson, John A. Power, Jochen Braunmiller, Andrew B. Lockhart, Lloyd Lynch, Wendy McCausland, Charlotte A. Rowe, Thomas Shea, Randall A. White, and Charles I. Breithaupt

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N-Amino Peptide Scanning Reveals Inhibitors of Aβ42 Aggregation, Khalilia C. Tillett and Juan R. Valle

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Population Genomics of Three Deep-sea Cephalopod Species Reveals Connectivity Between the Gulf of Mexico and Northwestern Atlantic Ocean, L. E. Timm, H. D. Bracken-Grissom, A. Sosnowski, M. Breitbart, M. Vecchione, and H. Judkins

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First Genome Sequence of the Gunnison’s Prairie Dog (Cynomys gunnisoni), a Keystone Species and Player in the Transmission of Sylvatic Plague, Mirian T. N. Tsuchiya, Rebecca B. Dikow, and Loren Cassin-Sackett

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Democracy, Liberalism, and Discretion: The Political Puzzle of the Administrative State, Stephen Turner

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Explaining Away Crime: The Race Narrative in American Sociology and Ethical Theory, Stephen Turner

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Freud in Many Contexts, Stephen Turner

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Habit Is Thus the Enormous Flywheel of Society: Pragmatism. Social Theory, and Cognitive Science, Stephen Turner

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Relativism in the Social Sciences, Stephen Turner

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The Stone in the Shoe: Weber Today, Stephen Turner

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The Autonomy and Integrity of Science, Stephen Turner and Daryl E. Chubin

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What are Democratic Values? A Neo-Kelsenian Approach, Stephen Turner and George Mazur

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The Changing Temptations of Science, Stephen P. Turner and Daryl E. Chubin

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Quantifying Rates of “Rifting while Drifting” in the Southern Gulf of California: The role of the Southern Baja California Microplate and its Eastern Boundary Zone, Paul J. Umhoefer, C. Plattner, and Rocco Malservisi

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Tuberculosis Clinical Presentation and Treatment Outcomes in Pregnancy: a Prospective Cohort Study, Brittney J. van de Water, Meredith B. Brooks, Chuan-Chin Huang, Letizia Trevisi, Leonid Lecca, Carmen Contreras, Jerome Galea, Roger Calderon, Rosa Yataco, Megan Murray, and Mercedes C. Becerra

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Morphodynamic Modelling of the Wilderness Breach, Fire Island, New York. Part I: Model set-up and Validation, Maarten van Ormondt, Timothy R. Nelson, Cheryl J. Hapke, and Dano Roelvink

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Early Life History Growth in Fish Reflects Consumption-mortality Tradeoffs, Kelly Vasbinder and Cameron Ainsworth

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Monitoring the Fate of Injected CO2 using Geodetic Techniques, Donald W. Vasco, Timothy H. Dixon, Alessandro Ferretti, and Sergey V. Samsonov

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Spawning Origins and Ontogenetic Movements for Demersal Fishes: An Approach Using Eye-lens Stable Isotopes, Julie L. Vecchio and Ernst B. Peebles

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Introducing Seven Transition Metal Ions into Terpyridine-Based Supramolecules: Self-Assembly and Dynamic Ligand Exchange Study, Lei Wang, Bo Song, Sandra Khalife, Yiming Li, Li-June Ming, Shi Bai, Yaping Xu, Hao Yu, Ming Wang, Heng Wang, and Xiaopeng Li