Marine Science Faculty Publications

 
This is a select list of works produced by the faculty of the USF College of Marine Science. Materials are included when two conditions are satisfied: 1) the creator approves inclusion and 2) the publisher allows the material to be placed in the repository. Please direct questions or requests to expand the list of materials to Jason Boczar.

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Submissions from 2017

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Winds on the West Florida Shelf: Regional Comparisons between Observations and Model Estimates, Dennis A. Mayer, Robert H. Weisberg, Lianyuan Zheng, and Yonggang Liu

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Satellite Remote Sensing for Coastal Management: a Review of Successful Applications, M. J. McCarthy, K. E. Colna, M. M. El-Mezayen, A. E. Laureano-Rosario, P. Méndez-Lázaro, Daniel B. Otis, G. Toro-Farmer, M. Vega-Rodriguez, and Frank E. Muller-Karger

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Dataset for: Toxicity and Mutagenicity of the Gulf of Mexico Waters during and after the Deepwater Horizon Oil Spill, July 2010-August 2013, Lauren McDaniel

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Development of a marine compatible biological assay for mutagenic compounds, Lauren McDaniel

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Fish Exposure Studies: Associated water, sediment and food microbiology and mutagenic potential, Lauren McDaniel

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Microalgae Bioproduction – Feeds, Foods, Nutraceuticals, and Polymers, Clifford R. Merz and Kevan L. Main

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Changes in Residence Time due to Large-Scale Infrastructure in a Coastal Plain Estuary, Steven D. Meyers, Amanda J. Moss, and Mark E. Luther

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Estimating Particulate Inorganic Carbon Concentrations of the Global Ocean From Ocean Color Measurements Using a Reflectance Difference Approach, C. Mitchell, C. Hu, B. Bowler, D. Drapeau, and W. M. Balch

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Sea Level Rise, Gary Mitchum, Andrea Dutton, Don P. Chambers, and Shimon Wdowinski

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Temporal analysis of NRDA macrofauna data, northern Gulf of Mexico, 2010, 2011, and 2014, Paul Montagna

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Temporal analysis of NRDA sediment chemistry data, northern Gulf of Mexico, 2010, 2011, and 2014, Paul Montagna

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Dynamics of Larger Benthic Foraminiferal Populations in the Upper Florida Keys Reef Tract, USA: Comparisons with other Coral Reef Bioindicators, Elizabeth F. Moses, Pamela Hallock, and John E. Fauth

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Projections of Future Habitat Use by Atlantic Bluefin Tuna: Mechanistic Vs. Correlative Distribution Models, B. A. Muhling, R. Brill, J. T. Lamkin, M. A. Roffer, S. K. Lee, Y. Liu, and Frank E. Muller-Karger

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Monitoring Biodiversity Change through Effective Global Coordination, Frank E. Muller-Karger

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Spectroscopy for Global Observation of Coastal and Inland Aquatic Habitats, Frank E. Muller-Karger

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A Globally Deployable Strategy for Co-Development of Adaptation Preferences to Sea-Level Rise: the Public Participation Case of Santos, Brazil, Frank E. Muller-Karger and Catherine J. Reynolds

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Megaregions Among the Large Marine Ecosystems of the Americas, Frank E. Muller-Karger, Digna Rueda-Roa, F. P. Chavez, M. T. Kavanaugh, and M. A. Roffer

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Response of Marginopora vertebralis (Foraminifera) from Laucala Bay, Fiji, to Changing Ocean pH, Roselyn Naidu, Pamela Hallock, Jonathan Erez, and Matakite Maata

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Monitoring Biodiversity Change through Effective Global Coordination, Laetitia M. Navarro, Néstor Fernández, Carlos Guerra, Rob Guralnick, W Daniel Kissling, Maria Cecilia Londoño, Frank Muller-Karger, Eren Turak, Patricia Balvanera, Mark J. Costello, Aurelie Delavaud, GY El Serafy, Simon Ferrier, Ilse Geijzendorffer, Gary N. Geller, Walter Jetz, Eun-Shik Kim, HyeJin Kim, Corinne S. Martin, Melodie A. McGeoch, Tuyeni H. Mwampamba, Jeanne L. Nel, Emily Nicholson, Nathalie Pettorelli, Michael E. Schaepman, Andrew Skidmore, Isabel Sousa Pinto, Sheila Vergara, Petteri Vihervaara, Haigen Xu, Tetsukazu Yahara, Mike Gill, and Henrique M. Pereira

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Improving Detection of Short-duration Fishing Behaviour in Vessel Tracks by Feature Engineering of Training Data, Shay O’Farrell, James N. Sanchirico, Iliana Chollett, Marcy Cockrell, Steven A. Murawski, Jordan T. Watson, Alan Haynie, Andrew Strelcheck, and Larry Perruso

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Assessment of Fe(III) and Eu(III) Complexation by Silicate in Aqueous Solutions, James T. Patten and Robert H. Byrne

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Diet Analysis of North Central Gulf of Mexico Demersal Shelf Fishes, March 2015-December 2016, William Patterson and Kristen Dahl

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Stable Isotope Analysis of North Central Gulf of Mexico Demersal Shelf Fishes, June 2015 - August 2016, William Patterson and Kristen Dahl

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Remote Sensing of Bottom Pressure from GRACE Satellites, Cecilia Peralta-Ferriz, Felix W. Landerer, Don P. Chambers, Denis Volkov, and William Llovel

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Distribution of oil concentrations and oil mass in the Gulf of Mexico estimated from the Connectivity Modeling System simulation of the Deepwater Horizon 2010 oil spill, Natalie Perlin and Claire B. Paris-Limouzy

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Distribution of oil concentrations and oil mass in the Gulf of Mexico estimated from the Connectivity Modeling System simulation of the Deepwater Horizon 2010 oil spill; oil treated with dispersant, Natalie Perlin and Claire B. Paris-Limouzy

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Distribution of oil concentrations in the Gulf of Mexico estimated from the Connectivity Modeling System simulation of the Deepwater Horizon 2010 oil spill; uniform initial droplet size distribution, Natalie Perlin and Claire B. Paris-Limouzy

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Distribution of oil concentrations in the Gulf of Mexico estimated from the Connectivity Modeling System simulation of the Deepwater Horizon 2010 oil spill; with wind drift, Natalie Perlin and Claire B. Paris-Limouzy

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Assessing Coral Reef Health in the North Ari Atoll (Maldives) Using the FoRAM Index, Chiara Pisapia, Pamela Hallock, and Silvia Spezzaferri

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Thoughts on Improving Innovation: What Are the Characteristics of Innovation and How Do We Cultivate Them?, Victor Poirier, Lyle H. Schwartz, David Eddy, Richard Berman, Selim Chacour, James Wynne, William Cavanaugh, Dean F. Martin, Robert Byrne, and Paul R. Sanberg

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Genome Sequence of Euphorbia mosaic virus from Passionfruit and Euphorbia heterophylla in Florida, J. E. Polston, M. A. Londoño, A. L. Cohen, M. Padilla-Rodriguez, K. Rosario, and Mya Breitbart

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Reef Building and Carbonate Production Modes in the West-Central Tethys during the Cenozoic, Luis Pomar, Juan I. Baceta, Pamela Hallock, Guillem Mateu-Vicens, and Daniela Basso

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Environmental Drivers of Benthic Communities and Habitat Heterogeneity on an East Antarctic Shelf, Alexandra L. Post, Caroline Lavoie, Eugene W. Domack, Amy Leventer, Amelia E. Shevenell, Alexander D. Fraser, and NBP 14-02 SCIENCE TEAM

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An Ice Sheet Model Validation Framework for the Greenland Ice Sheet, Stephen F. Price, Matthew J. Hoffman, Jennifer A. Bonin, Ian M. Howat, Thomas Neumann, Jack Saba, Irina Tezaur, Jeffrey Guerber, Don P. Chambers, Katherine J. Evans, Joseph H. Kennedy, Jan Lenaerts, William H. Lipscomb, Mauro Perego, Andrew G. Salinger, Raymond S. Tuminaro, Michiel R. van den Broeke, and Sophie M. Nowicki

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Species Specific Metabolic Capacity of Naphthalene and Phenanthrene in Three Species of Marine Teleosts Exposed to Deepwater Horizon Crude Oil, Erin Pulster

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Species-Specific Metabolism of Naphthalene and Phenanthrene in 3 Species of Marine Teleosts Exposed to Deepwater Horizon Crude Oil, Erin Pulster, Kevan Main, Dana Wetzel, and Steven Murawski

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VIIRS Captures Phytoplankton Vertical Migration in the NE Gulf of Mexico, Lin Qi, Chuanmin Hu, Brian B. Barnes, and Zhongping Lee

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Floating Algae Blooms in the East China Sea, Lin Qi, Chuanmin Hu, Mengqiu Wang, Shaoling Shang, and Cara Wilson

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Requirement of Minimal Signal-to-noise Ratios of Ocean Color Sensors and Uncertainties of Ocean Color Products, Lin Qi, Zhongping Lee, Chuanmin Hu, and Menghua Wang

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Characterization of Northern Gulf of Mexico sediments using ultrahigh resolution FTICR-MS, Jagos Radovic

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Marine snow hampers oil biodegradation in an ocean sediment layer, Shokouh Rahsepar

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Interpreting the Role of Ph on Stable Isotopes in Large Benthic Foraminifera, L. L. Robbins, P. O. Knorr, J. G. Wynn, Pamela Hallock, and P. J. Harries

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Time series of northern Gulf of Mexico hydrocarbon data, 2010-2013, Isabel C. Romero

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Large-Scale Deposition of Weathered Oil in the Gulf of Mexico Following a Deep-Water Oil Spill, Isabel Romero, Gerardo Toro-Farmer, Arne R. Diercks, Patrick Schwing, Frank E. Muller-Karger, Steven Murawski, and David Hollander

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Virus Discovery in All Three Major Lineages of Terrestrial Arthropods Highlights the Diversity of Single-stranded DNA Viruses Associated with Invertebrates, Karyna Rosario, Kaitlin Mettel, Bayleigh Benner, Ryan Johnson, Catherine Scott, Sohath Yusseff-Vanegas, Christopher Baker, Deby Cassill, Caroline Storer, Arvind Varsani, and Mya Breitbart

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Spatial Variability of Spanish Sardine (Sardinella Aurita) Abundance as Related to the Upwelling Cycle Off the Southeastern Caribbean Sea, Digna Rueda-Roa, Jeremy Mendoza, Frank E. Muller-Karger, Juan José Cárdenas, Alina Achury, and Yrene Astor

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The Acceleration of Dissolved Cobalt's Ecological Stoichiometry due to Biological Uptake, Remineralization, and Scavenging in the Atlantic Ocean, Mak A. Saito, Abagail E. Noble, Nicholas Hawco, Benjamin S. Twining, Daniel C. Ohnemus, Seth G. John, Phoebe Lam, Tim M. Conway, Rod Johnson, Dawn Moran, and Matthew McIlvin

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Methane bubble rise velocities in artificial seawater and demineralized water under deep-sea and ambient conditions, Michael Schlüter and Katrin Laqua

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Density of artificial seawater, Michael Schlüter, Katrin Laqua, and Simeon Pesch

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Density of Louisiana Sweet Crude Oil, Michael Schlüter, Katrin Laqua, and Simeon Pesch

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Expansion of Gas-Saturated Crude Oil Droplets, Michael Schlüter and Simeon Pesch

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Rise Behavior of Gas-Saturated Crude Oil Droplets, Michael Schlüter and Simeon Pesch

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Justo Sierra Cruise Sample Data, southern Gulf of Mexico, 2015, Patrick Schwing

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Northern Gulf of Mexico Benthic and Planktic Foraminifera Taxonomy, 2011-2015, Patrick Schwing

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Northern Gulf of Mexico Pb-210 Inventories, 2010-2013, Patrick Schwing

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Weatherbird II Sediment Cruise Sample Data 2015, Patrick Schwing

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Constraining the Spatial Extent of Marine Oil Snow Sedimentation and Flocculent Accumulation Following the Deepwater Horizon Event Using an Excess 210Pb Flux Approach, Patrick Schwing, Greg Brooks, Rebecca Larson, C. W. Holmes, Bryan J. O'Malley, and David Hollander

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Cruises R/V Endeavor (EN505) and R/V Weatherbird II (WB1205) Gulf of Mexico Water Chemistry (Spring 2012), Patrick Schwing and Jeff Chanton

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Gulf of Mexico Benthic and Planktic Foraminifera Carbon Isotopes, 2015, Patrick Schwing and Jeff Chanton

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Impacts and Recovery of Benthic Marine Environments in the Aftermath of the DWH Event, Patrick Schwing, David Hollander, Paul Montagna, and Peter Santschi

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Weatherbird II Sediment Cruise Sample Data (2016), Patrick Schwing and Steven Murawski

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Characterizing the Variability of Benthic Foraminifera in the Northeastern Gulf of Mexico following the Deepwater Horizon Event (2010-2012), Patrick Schwing, Bryan J. O'Malley, Isabel C. Romero, M Martínez-Colón, D. W. Hastings, M. A. Glabach, E. M. Hladky, Anthony M. Greco, and David Hollander

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Sensing an Intense Phytoplankton Bloom in the Western Taiwan Strait from Radiometric Measurements on a UAV, Shaoling Shang, Zhongping Lee, Gong Lin, Chuanmin Hu, Lianghai Shi, Yongnian Zhang, Xueding Li, Jingyu Wu, and Jing Yan

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Spectrophotometric Determination of Carbonate Ion Concentrations: Elimination of Instrument-Dependent Offsets and Calculation of In Situ Saturation States, Jonathan D. Sharp, Robert H. Byrne, Xuewu Liu, Richard A. Feely, Erin E. Cuyler, Rik Wanninkhof, and Simone R. Alin

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Virus Taxonomy in the Age of Metagenomics, Peter Simmonds, Mike Adams, Mária Benkő, Mya Breitbart, J. Rodney Brister, and Eric Carstens

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Bent Plume Model source code for the Texas A&M Oilspill Calculator (TAMOC), Scott A. Socolofsky and Anusha Dissanayake

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Nearfield Plume Hindcast of the Deepwater Horizon blowout from April 2010 to July 2010 using the Texas A&M Oilspill Calculator: Bent Plume Model, Scott A. Socolofsky and Anusha Dissanayake

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Europium Silicate Complexation at 25 °C and 0.7 Molar Ionic Strength, Alan L. Soli and Robert H. Byrne

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Southward Flow on the Western Flank of the Florida Current, Alexander V. Soloviev, Amy Hirons, Christopher Maingot, Cayla W. Dean, Richard E. Dodge, Alexander E. Yankovsky, Jon Wood, Robert H. Weisberg, Mark E. Luther, and Julian P. McCreary

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Characterization of Karenia Brevis Blooms on the West Florida Shelf Using Ocean Color Satellite Imagery: Implications for Bloom Maintenance and Evolution, I. M. Soto, Frank E. Muller-Karger, Chuanmin Hu, and J. Wolny

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The Periodic Topography of Ice Stream Beds: Insights from the Fourier Spectra of Mega-scale Glacial Lineations, Matteo Spagnolo, Timothy C. Bartholomaus, Chris D. Clark, Chris R. Stokes, Nigel Atkinson, Julian A. Dowdeswell, Jeremy C. Ely, Alastair G. C. Graham, Kelly A. Hogan, Edward C. King, Robert D. Larter, Stephen J. Livingstone, and Hamish D. Pritchard

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Biodiversity Effects of the Predation Gauntlet, Adrian C. Stier, Christopher D. Stallings, Jameal F. Samhouri, Mark A. Albins, and Glenn R. Almany

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Copper Toxicity Response Influences Mesotrophic Synechococcus Community Structure, Rhona K. Stuart, Randelle Bundy, Kristen N. Buck, Majid Ghassemain, Kathy Barbeau, and Brian Palenik

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Reef Calcifiers Are Adapted to Episodic Heat Stress but Vulnerable to Sustained Warming, Marleen Stuhr, Claire E. Reymond, Vera Rieder, Pamela Hallock, Jörg Rahnenführer, Hildegard Westphal, and Michal Kucera

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Sub-ice Shelf Sediment Geochronology Utilizing Novel Radiocarbon Methodology for Highly Detrital Sediments, C. Subt, H. I. Yoon, K. C. Yoo, J. I. Lee, A. Leventer, Eugene W. Domack, and Brad E. Rosenheim

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Remote-Sensing Estimation of Phytoplankton Size Classes From GOCI Satellite Measurements in Bohai Sea and Yellow Sea, Deyong Sun, Yu Huan, Zhongfeng Qiu, Chuanmin Hu, Shengqiang Wang, and Yijun He

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Deepwater Horizon incident oil slick morphology determined from United States Geological Survey oil volume product, May 17 2010, Shaojie Sun

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Ixtoc-I oil spill footprints derived from Coastal Zone Color Scanner and Landsat/MSS imagery, Shaojie Sun

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Sun glint critical angle oil detection, Shaojie Sun

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Trophodynamic Effects of Climate Change-induced Alterations to Primary Production along the Western Antarctic Peninsula, Paul Mark Suprenand and Cameron H. Ainsworth

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Microbial Source Tracking in Shellfish Harvesting Waters in the Gulf of Nicoya, Costa Rica, Erin M. Symonds, Suzanne Young, M. E. Verbyla, S. M. McQuaig-Ulrich, E. Ross, Juan Jimenez, Valerie J. Harwood, and Mya Breitbart

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The Integral Role of Iron in Ocean Biogeochemistry, Alessandro Tagliabue, Andrew R. Bowie, Philip W. Boyd, Kristen N. Buck, Kenneth S. Johnson, and Mak A. Saito

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Echosounder for Biological Surveys Using Ocean Gliders, J. Christopher Taylor and Chad Lembke

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Sea Level Variability and Change, P. R. Thompson, M. A. Merrifield, E. Leuliette, W. Sweet, D. P. Chambers, B. D. Hamlington, S. Jevrejeva, J. J. Mara, G. T. Mitchum, and R. S. Nerem

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Western Gulf of Mexico Vertical Longline data from 2016, Tara Topping

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Life-history Studies by Non-lethal Sampling: Using Microchemical Constituents of Fin Rays as Chronological Recorders, O. E. Tzadik, E. B. Peebles, and C. D. Stallings

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Chemical Archives in Fishes Beyond Otoliths: A Review on the Use of Other Body Parts as Chronological Recorders of Microchemical Constituents for Expanding Interpretations of Environmental, Ecological, and Life-history Changes, Orian E. Tzadik, Joseph S. Curtis, Jennifer E. Granneman, Benjamin N. Kurth, Timothy J. Pusack, Amy A. Wallace, David J. Hollander, Ernst B. Peebles, and Christopher D. Stallings

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The Effects of Spatial Scale on Assigning Nursery Habitats in Atlantic Goliath Groupers (Epinephelus Itajara) Using Non-lethal Analyses of Fin Rays, Orian E. Tzadik, David L. Jones, Ernst B. Peebles, Christopher C. Koenig, and Christopher D. Stallings

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Differential Habitat Use of Reef Fishes on a Shelf-edge Reef off La Parguera, Puerto Rico, Orian E. Tzadik, Joshua P. Kilborn, and Richard Appeldoorn

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Marine snow enhances the adverse effects of oil on benthic invertebrates, Justine S. van Eenennaam, Shokouh Rahsepar, Jagos R. Radovic, Thomas B.P. Oldenburg, Jessica Wonink, Alette A.M. Langenhoff, Albertinka J. Murk, and Edwin M. Foekema

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Distribution and characteristics of oil droplets from the DWH spill: a simulation using the Connectivity Modeling System coupled nearfield-farfield models, Ana Vaz and Claire Paris

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Short Organic Carbon Turnover Time and Narrow 14C Age Spectra in Early Holocene wetland Paleosols, Lael Vetter, Brad E. Rosenheim, Alvaro Fernandez, and Torbjörn E. Törnqvist

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Molecular characterization of benthic foraminifera communities from the Northeastern Gulf of Mexico shelf and slope following the Deepwater Horizon event, 2012-2013, Jeffrey Wade and Joseph A. Moss

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Stable and Radiocarbon Isotopic Composition of Dissolved Organic Matter in the Gulf of Mexico, B. D. Walker, E. R. M. Druffel, J. Kolasinski, B. J. Roberts, X. Xu, and B. E. Rosenheim

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Mapping the Soundscape Off the SoutheasternUSA by Using Passive Acoustic Glider Technology, Carrie C. Wall, David A. Mann, Chad Lembke, Chris Taylor, Ruoying He, and Todd Kellison

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More Surprises in the Global Greenhouse: Human Health Impacts from Recent Toxic Marine Aerosol Formations, Due to Centennial Alterations of World-Wide Coastal Food Webs, John J. Walsh, Jason M. Lenes, Robert H. Weisberg, Lianyuan Zheng, Chuanmin Hu, Kent A. Fanning Ph.D., R. Snyder, and J. Smith

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Variability of Tropical Cyclone Rapid Intensification in the North Atlantic and Its Relationship with Climate Variations, Chunzai Wang, Xidong Wang, Robert H. Weisberg, and Michael L. Black

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Dataset for: Sun glint requirement for the remote detection of surface oil films, Mengqiu Wang

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Oil extraction Visible Infrared Imaging Radiometer Suite (VIIRS) Imagery, Western Gulf of Mexico 2005-2013, Mengqiu Wang

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Predicting Sargassum Blooms in the Caribbean Sea from MODIS Observations, Mengqiu Wang and Chuanmin Hu