Green Archiving For USF Faculty: Getting Started

  1. Update your CV to include all work completed since arriving at USF.
  2. Write a short email giving us permission to post your research. We will seek copyright permission to post the digital item(s).
  3. Attach your CV and send the email to: scholarcommons@usf.edu

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Submissions from 2018

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The Sierra Leone Rare Earth Minerals Landscape: An Old or New Frontier?, Fenda A. Akiwumi and Lorenzo D'Angelo

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Ligand-mediated Protein Degradation reveals Functional Conservation among Sequence Variants of the CUL4-type E3 Ligase Substrate Receptor Cereblon, Afua A. Akuffo, Aileen Y. Alontaga, Rainer Metcalf, Matthew S. Beatty, Andreas Becker, Jessica M. McDaniel, Rebecca S. Hesterberg, William E. Goodheart, Steven Gunawan, Muhammad Ayaz, Kenyon G. Daniel, and Wayne Guida

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A Multi-Level Intrusion Detection System for Wireless Sensor Networks Based on Immune Theory, Vishwa T. Alaparthy and Salvatore D. Morgera

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A Lamina-Emergent Frustum Using a Bistable Collapsible Compliant Mechanism, Rami Alfattani and Craig P. Lusk

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Chronic Hippocampal Abnormalities and Blunted HPA Axis in an Animal Model of Repeated Unpredictable Stress, Moustafa Algamal, Joseph O. Ojo, Carlyn P. Lungmus, Phillip Muza, Constance Cammarata, Margaret J. Owens, Benoit C. Mouzon, David M. Diamond, Michael Mullan, and Fiona Crawford

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Work-Related Stressors Among Maternal, Infant, and Early Childhood Home Visiting (MIECHV) Home Visitors: A Qualitative Study, Paige J. Alitz, Shana Geary, Pamela C. Birriel, Takudzwa Sayi, Rema Ramakrishnan, Omotola Balogun, Alison Salloum, and Jennifer T. Marshall

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Inflammation, Adiposity, and Progression of Arterial Stiffness in Adolescents with Type 1 Diabetes: The SEARCH CVD Study, Amy C. Alman, Jennifer W. Talton, R. P. Wadwa, Elaine M. Urbina, Lawrence M. Dolan, Richard F. Hamman, Ralph B. D'Agostino Jr., Santica M. Marcovina, and Dana M. Dabelea

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p-n Based Photoelectrochemical Device for Water Splitting Application Alpha-Hematite (α-Fe2O3)-Titanium Dioxide (tio2) as N-Electrode & Polyhexylthiophene (rrphth) - Nanodiamond (ND) as P-Electrode, Hussein Alrobei, Hye Young Lee, Ashok Kumar, and Manoj K. Ram

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Food for Contagion: Synthesis and Future Directions for Studying Host–Parasite Responses to Resource Shifts in Anthropogenic Environments, Sonia Altizer, Daniel J. Becker, Jonathan H. Epstein, Kristian M. Forbes, Thomas R. Gillespie, Richard J. Hall, Dana M. Hawley, Sonia M. Hernandez, Lynn B. Martin, Raina K. Plowright, Dara A. Satterfield, and Daniel G. Streicker

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Transcriptome Response of the Foundation Plant Spartina alterniflora to the Deepwater Horizon Oil Spill, Mariano F. Alvarez, Julie Ferreira de Carvalho, Armel Salmon, Malika L. Ainouche, Armand Cavé‐Radet, Abdelhak El Amrani, Tammy E. Foster, Sydney Moyer, and Christina L. Richards

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Does the Mexican sugar-sweetened beverage tax have a signaling effect? ENSANUT 2016, Cristina Álvarez-Sánchez, Isobel Contento, Alejandra Jiménez-Aguilar, Pamela Koch, Heewon L. Gray, Laura A. Guerra, Juan Rivera-Dommarco, Rebeca Uribe-Carvajal, and Teresa Shamah-Levy

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A Cross-Layer, Anomaly-Based IDS for WSN and MANET, Amar Amouri, Salvatore D. Morgera, Mohamed A. Bencherif, and Raju Manthena

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Implementation of a Decentralized Community-based Treatment Program to Improve the Management of Buruli Ulcer in the Ouinhi District of Benin, West Africa, Arnaud S. Amoussouhoui, Ghislain E. Sopoh, Anita C. Wadagni, Roch C. Johnson, Paulin Aoulou, Inès E. Agbo, Jean-Gabin Houezo, Micah Boyer, and Mark Nichter

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Reliable Delay Based Algorithm to Boost PUF Security Against Modeling Attacks, Fathi Amsaad, Mohammed Niamat, Amer Dawoud, and Selcuk Kose

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Status of Population‐based Birth Defects Surveillance Programs before and after the Zika Public Health Response in the United States, Marlene Anderka, Cara T. Mai, Emily M. Judson, Peter H. Langlois, Philip J. Lupo, Kimberlea Hauser, Jason L. Salemi, Jane Correia, Mark A. Canfield, and Russell S. Kirby

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Rejoinder to “Graphics to Facilitate Informative Discussion and Team Decision-making”, Christine Anderson-Cook and Lu Lu

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Graphics to Facilitate Informative Discussion and Team Decision Making, Christine M. Anderson-Cook and Lu Lu

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Bm-iAANAT and its Potential Role in Fatty Acid Amide Biosynthesis in Bombyx mori, Ryan L. Anderson, Matthew R. Battistini, Dylan J. Wallis, Christopher Shoji, Brian G. O'Flynn, John E. Dillashaw, and David J Merkler

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The Relationship between Obstructive Sleep Apnea and Alzheimer’s Disease, Andreia G. Andrade, Omonigho M. Bubu, Andrew W. Varga, and Ricardo S. Osorio

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Influence of River-Induced Fronts on Hydrocarbon Transport: A Multiplatform Observational Study, Yannis Androulidakis, Vassiliki Kourafalou, Tamay Özgökmen, Oscar Garcia-Pineda, Björn Lund, Matthieu Le Hénaff, Chuanmin Hu, Brian K. Haus, Guillaume Novelli, Cedric Guigand, HeeSook Kang, Lars Hole, and Jochen Horstmann

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Protein Kinase C-ζ Stimulates Colorectal Cancer Cell Carcinogenesis via PKC-ζ/Rac1/Pak1/β-Catenin Signaling Cascade, S. M. Anisul Islam, Rekha Patel, and Mildred Acevedo-Duncan

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Lactation Consultants’ Perceived Barriers to Providing Professional Breastfeeding Support, Erica Hesch Anstey, Martha L. Coulter, Cecilia M. Jevitt, Kay M. Perrin, Sharon Dabrow, Lynne B. Klasko-Foster, and Ellen M. Daley

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Early Uneven Ear Input Induces Long-Lasting Differences in Left–Right Motor Function, Michelle W. Antoine, Xiaoxia Zhu, Marianne Dieterich, Thomas Brandt, Sarah Vijayakumar, Nicholas McKeehan, Joseph C. Arezzo, and Robert D. Frisina

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Inhibition of Atypical Protein Kinase C‑ι Effectively Reduces the Malignancy of Prostate Cancer cells by Downregulating the NF-κB Signaling Cascade, André H. Apostolatos, Wishrawana Sarathi Bandara Ratnayake, Hla Win-Piazza, Christopher A. Apostolatos, Tracess Smalley, Loveleen Kang, Raoul Salup, Robert Hill, and Mildred Acevedo-Duncan

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An Updated Analysis of Direct-to-Consumer Television Advertisements for Prescription Drugs, Janelle Applequist and Jennifer G. Bell

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Adaptive Control of a Rigid Body Vehicle on Exponential Coordinates with Guaranteed Performance, Ehsan Arabi, Selahattin Burak Sarsilmaz, Tansel Yucelen, Mohammad Maadani, Eric A. Butcher, and Morad Nazari

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On Set-Theoretic Model Reference Adaptive Control of Uncertain Dynamical Systems Subject to Actuator Dynamics, Ehsan Arabi and Tansel Yucelen

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Set-Theoretic Model Reference Adaptive Control of a Generic Transport Model, Ehsan Arabi, Tansel Yucelen, and Nhan T. Nguyen

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Further Results on Finite-Time Distributed Control of Multiagent Systems With Time Transformation, Ehsan Arabi, Tansel Yucelen, and John R. Singler

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Estimating the Elimination Feasibility in the 'End Game' of Control Efforts for Parasites subjected to Regular Mass Drug Administration: Methods and their Application to Schistosomiasis, Arathi Arakala, Christopher M. Hoover, John M. Marshall, Susanne H. Sokolow, Guilio A. De Leo, Jason R. Rohr, Justin V. Remais, and Manoj Gambhir

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Developmental Changes in the Feedback Related Negativity from 8 to 14 years, Yael Arbel, Kayleigh N. McCarty, Mark S. Goldman, Emanuel Donchin, and Ty Brumback

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Juan Antonio Frago, “Don Quijote”. Lengua y Sociedad, David Arbesu

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Academic Assessment and Intervention, Scott P. Ardoin and Stacy-Ann A. January

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Zero‐inflated Multiscale Models for Aggregated Small Area Health Data, Mehreteab Aregay, Andrew B. Lawson, Christel Faes, Russell S. Kirby, Rachel Carroll, and Kevin Watjou

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Differential Effects of Solid-phase Extraction Resins on the Measurement of Dissolved Lignin-phenols and Organic Matter Composition in Natural Waters, Ana R. Arellano, Thomas S. Bianchi, Jack A. Hutchings, Michael R. Shields, and Xingqian Cui

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Characterization and Engineering of a Plastic-Degrading Aromatic Polyesterase, Harry P. Austin, Mark D. Allen, Bryon S. Donohoe, Nicholas A. Rorrer, Fiona Kearns, Rodrigo L. Silveira, Benjamin C. Pollard, Graham Dominick, and H. Lee Woodcock III

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Fabrication and Characterization of NiO based Metal−Insulator−Metal Diode using Langmuir-Blodgett Method for High Frequency Rectification, Ibrahim Azad, Manoj K. Ram, D. Y. Goswami, and Elias Stefanakos

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Phosphorylation Induced Cochaperone Unfolding Promotes Kinase Recruitment and Client Class-Specific Hsp90 Phosphorylation, Ashleigh B. Bachman, Dimitra Keramisanou, Wanping Xu, Kristin Beebe, Michael A. Moses, M. V. Vasantha Kumar, Geoffrey Gray, Radwan Ebna Noor, Arjan van der Vaart, Len Neckers, and Ioannis Gelis

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Hydrocarbon Degradation and Response of Seafloor Sediment Bacterial Community in the Northern Gulf of Mexico to Light Louisiana Sweet Crude Oil, Hernando P. Bacosa, Deana L. Erdner, Brad E. Rosenheim, Prateek Shetty, Kiley W. Seitz, Brett J. Baker, and Zhanfei Liu

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Understanding the Roles of Patient Symptoms and Subjective Appraisals in Well-Being Among Breast Cancer Patients, A. Badana, V. Marino, M. Templeman, C. Tofthagen, S. McMillan, B. Small, and W. Haley

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Distinct Mechanisms of Alterations in DNA Methylation/Demethylation Leading to Myelodysplastic Syndromes/Acute Myeloid Leukemia and Chronic Lymphocytic Leukemia, Cristina Bagacean, Anne Bordron, Tempescul Adrian, Jean Christophe Ianotto, Gaelle Guillerm, Wesley Brooks, Marie-Anne Couturier, Mihnea Zdrenghea, Christian Berthou, and Yves Renaudineau

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Alligator mississippiensis Sternal and Shoulder Girdle Mobility Increase Stride Length during High Walks, David B. Baier, Brigid M. Garrity, Sabine Moritz, and Ryan M. Carney

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Semi‐Automated Pulmonary Nodule Interval Segmentation using the NLST Data, Yoganand Balagurunathan, Andrew Beers, Jayashree Kalpathy‐Cramer, Michael McNitt-Gray, Lubomir Hadjiiski, Bensheng Zhao, Jiangguo Zhu, Hao Yang, Dmitry Cherezov, and Dmitry Goldgof

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An Inherent Fog Network: Brain-Spinal Cord-Nerve Networks, Eren Balevi and Richard D. Gitlin

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Triangle-Tilings in Graphs Without Large Independent Sets, Jozsef Balogh, Andrew McDowell, Theodore Molla, and Richard Mycroft

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The Association Between Physical Mobility and Incident Cognitive Impairment in Older Puerto Rican Adults, C. Barba, A. Dávila Roman, R. Andel, K. Markides, and M. Crowe

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Communicating/Organizing for Reliability, Resilience, and Safety: Special Issue Introduction, Joshua B. Barbour, Patrice M. Buzzanell, William J. Kinsella, and Keri K. Stephens

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Multi-band Spectral Matching Inversion Algorithm to Derive Water Column Properties in Optically Shallow Waters: An Optimization of Parameterization, Brian B. Barnes, Rodrigo Garcia, Chuanmin Hu, and Zhongping Lee

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Dynamics of Stony Coral and Octocoral Juvenile Assemblages Following Disturbance on Patch Reefs of the Florida Reef Tract, Lucy A. Bartlett, Vanessa I. P. Brinkhuis, Rob R. Ruzicka, Michael A. Colella, Kathleen S. Lunz, Erin H. Leone, and Pamela Hallock

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A Centuries-Long Delay between a Paleo-Ice-Shelf Collapse and Grounding-Line Retreat in the Whales Deep Basin, Eastern Ross Sea, Antarctica, Philip J. Bart, Matthew DeCesare, Brad E. Rosenheim, Wojceich Majewski, and Austin McGlannan

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Design Science Research Contributions: Finding a Balance between Artifact and Theory, Richard Baskerville, Abayomi Baiyere, Shirley Gregor, Alan Hevner, and Matti Rossi

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Generating Sets of Reidemeister Moves of Oriented Singular Links and Quandles, Khaled Bataineh, Mohamed Elhamdadi, Mustafa Hajij, and William Youmans

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Lump Solutions to a (2+1)-Dimensional Fifth-Order KdV-Like Equation, Sumayah Batwa and Wen-Xiu Ma

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Impact of Motivational Interviewing on Outcomes of an Adolescent Obesity Treatment: Results from the MI Values Randomized Controlled Pilot Trial, M. K. Bean, K. S. Ingersoll, P. Powell, Marilyn Stern, R. K. Evans, E. P. Wickham III, and S. E. Mazzeo

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Resistance at No Cost: The Transmissibility and Potential for Disease Progression of Drug-Resistant M. Tuberculosis, Mercedes C. Becerra, Chuan-Chin Huang, Leonid Lecca, Jamie Bayona, Carmen Contreras, Roger Calderon, Rosa Yataco, Jerome Galea, Zibiao Zhang, and Sidney Atwood

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Control of Thermal Expansion in a Low-density Framework Modification of Silicon, Matt Beekman, James A. Kaduk, Winnie Wong-Ng, Michael Troesch, Glenn S. Lee, and George S. Nolas

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Investigating the Origin of Continual Radio Frequency Impulses During Explosive Volcanic Eruptions, S. A. Behnke, H. E. Edens, R. J. Thomas, C. M. Smith, Stephen R. McNutt, A. R. Van Eaton, C. Cimarelli, and V. Cigala

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Young Skilled Deaf Readers have an Enhanced Perceptual Span in Reading, Nathalie N. Belanger, Michelle Lee, and Elizabeth R. Shotter

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Hydrogen Bonds in Crystalline D-alanine: Diffraction and Spectroscopic Evidence for Differences Between Enantiomers, Ezequiel A. Belo, Jose E. M. Pereira, Paulo T. Freire, Dimitri N. Argyriou, Juergen Eckert, and Heloisa N Bordallo

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Response to Comment on `Hydrogen Bonds in Crystalline D-alanine: Diffraction and Spectroscopic Evidence for Differences between Enantiomers', Ezequiel A. Belo, Jose E. M. Pereira, Paulo T. C. Freire, Dimitri N. Argyriou, Juergen Eckert, and Heloisa N. Bordallo

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A Numerical Model Investigation of the Impacts of Hurricane Sandy on Water Level Variability in Great South Bay, New York, Vanessa C.C. Bennett, Ryan P. Mulligan, and Cheryl J. Hapke

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Integrated Observations and Informatics Improve Understanding of Changing Marine Ecosystems, Abigail Benson, Cassandra M. Brooks, Gabrielle Canonico, Emmett Duffy, Frank Muller-Karger, Heidi M. Sosik, Patricia Miloslavich, and Eduardo Klein

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“The Baritone with Muscles in his Throat”: Vaughn Monroe and Masculine Sentimentality during the Second World War, Andrew S. Berish

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Irony and Sincerity in a Time of Crisis: Sentimental Piety in The Robe, Andrew S. Berish

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Space and Place in Jazz, Andrew S. Berish

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Demonstration of a Robust All-Silicon-Carbide Intracortical Neural Interface, Evans K. Bernardin, Christopher L. Frewin, Richard Everly, Jawad Ul Hassan, and Stephen E. Saddow

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LGBT Bullying in School: A Troubling Relational Story, Keith Berry

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Application of a Health Literacy Framework to Explore Patients’ Knowledge of the Link between HPV and Cancer, Alicia L. Best, Rachel Logan, Coralia Vázquez-Otero, Whitney Fung, Vanessa Chee, Erika L. Thompson, Seiichi Villalona, Lora M. A. Thompson, Clement K. Gwede, and Ellen M. Daley

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Application of a Health Literacy Framework to Explore Patients’ Knowledge of the Link between HPV and Cancer, Alicia Best, Rachel G. Logan, Coralia Vázquez-Otero, Whitney Fung, Vanessa Alicia Chee, Erika L. Thompson, Seiichi Villalona, Lora M. A. Thompson, Clement K. Gwede, and Ellen M. Daley

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Inhibition of Human Dendritic Cell ER Stress Response Reduces T Cell Alloreactivity Yet Spares Donor Anti-tumor Immunity, Brian C. Betts, Frederick L. Locke, Elizabeth M. Sagatys, Joseph Pidala, Kelly Walton, Meghan Menges, Jordan Reff, Asim Saha, Julie Y. Djeu, and Chang Won Kang

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RADX Modulates RAD51 Activity to Control Replication Fork Protection, Kamakoti P. Bhat, Archana Krishnamoorthy, Huzefa Dungrawala, Edwige B. Garcin, Mauro Modesti, and David Cortez

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User Response to Mandatory IT Use: A Coping Theory Perspective, Anol Bhattacherjee, Christopher J. Davis, Amy J. Connolly, and Neset Hikmet

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The Fate and Transport of Allochthonous Blue Carbon in Divergent Coastal Systems, Thomas S. Bianchi, Elise Morrison, Savanna Barry, Ana Arellano, Rusty A. Feagin, Audra Hinson, Marian Eriksson, Mead Allison, Christopher L. Osburn, and Diana Oviedo-Vargas

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Power and Social Control in Settler and Exploitation Colonies: The Experience of New France and French Colonial Africa, Liora Bigon and Ambe J. Njoh

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Critical Conversations about Transitional Justice in Nepal: Building Collaborations for Victim-Centric Practice, Krista Billingsley

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Intersectionality as Locality: Children and Transitional Justice in Nepal, Krista Billingsley

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Introduction to the Special Issue on Building Collaborations through Anthropological Research on the Missing, Krista Billingsley

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Evaluation of Digestion Methods for Analysis of Trace Metals in Mammalian Tissues and NIST 1577c, Grace A. Binder, Rainer Metcalf, Zachary Atlas, and Kenyon G. Daniel

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Do Squid Breathe through Their Skin?, Matthew A. Birk, Agnieszka K. Dymowska, and Brad A. Seibel

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Ocean Acidification does Not Limit Squid Metabolism via Blood Oxygen Supply, Matthew A. Birk, Erin L. McLean, and Brad A. Seibel

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Daily Zeaxanthin Supplementation Prevents Atrophy of the Retinal Pigment Epithelium (RPE) in a Mouse Model of Mitochondrial Oxidative Stress, Manas R. Biswal, Bradley D. Justis, Pingyang Han, Hong Li, Dennis Gierhart, Cheryl K. Dorey, and Alfred S. Lewin

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An Alternative to Static Climatologies: Robust Estimation of Open Ocean CO2 Variables and Nutrient Concentrations From T, S, and O2 Data Using Bayesian Neural Networks, Henry C. Bittig, Tobias Steinhoff, Hervé Claustre, Björn Fiedler, Nancy L. Williams, Raphaëlle Sauzède, Arne Körtzinger, and Jean-Pierre Gattuso

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Men Lacking a Caregiver Have Greater Risk of Long‐Term Nursing Home Placement After Stroke, Justin Blackburn, Karen C. Albright, William E. Haley, Virginia J. Howard, David L. Roth, Monika M. Safford, and Meredith L. Kilgore

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Prevalence and Correlates of Benzodiazepine Use, Misuse, and Use Disorders Among Adults in the United States, Carlos Blanco, Beth Han, Christopher M. Jones, Kimberly Johnson, and Wilson M. Compton

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Synthetic Capacity does not Predict Elasmobranchs' Ability to Maintain Trimethylamine Oxide Without a Dietary Contribution, Abigail B. Bockus and Brad A. Seibel

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Developments with Investigating descriptors for antimicrobial AApeptides and their derivatives, Olapeju Bolarinwa and Jianfeng Cai

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Sulfono-γ-AA Modified Peptides that Inhibit HIV-1 Fusion, Olapeju Bolarinwa, Meng Zhang, Erin Mulry, Min Lu, and Jianfeng Cai

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Using Satellite Laser Ranging to Measure Ice Mass Change in Greenland and Antarctica, Jennifer A. Bonin, Don P. Chambers, and Minkang Cheng

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Intraspecific Predator Inhibition, not a Prey Size Refuge, Enables Oyster Population Persistence During Predator Outbreaks, H. S. Booth, T. J. Pusack, J. W. White, C. D. Stallings, and D. L. Kimbro

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Using NMR Chemical Shifts to Determine Residue-specific Secondary Structure Populations for Intrinsically Disordered Proteins, Wade M. Borcherds and Gary W. Daughdrill

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Genetic and Environmental Influences on the Codevelopment among Borderline Personality Disorder Traits, Major Depression Symptoms, and Substance Use Disorder Symptoms from Adolescence to Young Adulthood, Marina A. Bornovalova, Brad Verhulst, Troy Alan Webber, Matt McGue, William G. Iacono, and Brian M. Hicks

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Temporal Evaluation of Evapotranspiration for Sugar Cane, Planted Forest and Native Forest using Landsat 8 Images and a Two-Source Energy Balance, Raoni W.D. Bosquilia, Christopher M.U. Neale, Sergio N. Duarte, Solon J. Longhi, Silvio F. de B. Ferraz, Frank E. Muller-Karger, and Matthew James Mccarthy

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Beyond Chlorophyll Fluorescence: The Time is Right to Expand Biological Measurements in Ocean Observing Programs, Emmanuel Boss, Anya Waite, Anya Waite, Frank Muller-Karger, Hidekatsu Yamazaki, Rik Wanninkhof, Julia Uitz, Sandy Thomalla, Heidi Sosik, Bernadette Sloyan, Anthony Richardson, Johannes Karstensen, Gérald Grégori, Katja Fennel, Herve Claustre, Marcela Cornejo, Ilana Berman‐Frank, Sonia Batten, and Silvia Acinas

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A History of Russia and Its Empire: From Mikhail Romanov to Vladimir Putin, Second Edition, Kees Boterbloem

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Review of Visions of Empire by Krishan Kumar, Kees Boterbloem

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Machine Learning Approaches to Evaluate Correlation Patterns in Allosteric Signaling: A Case Study of the PDZ2 Domain, Mohsen Botlani-Esfahani, Anhaf Siddiqui, and Sameer Varma

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Russian Doll Genes and Complex Chromosome Rearrangements in Oxytricha trifallax, Jasper Braun, Lukas Nabergall, Rafik Neme, Laura F. Landweber, Masahico Saito, and Nataša Jonoska

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Intraplate Earthquakes in Europe—Source Parameters from Regional Moment Tensor Analysis, Jochen Braunmiller

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Seismic Observations Following the July 2017 Pasco County, West Florida, Sinkhole Collapse, Jochen Braunmiller, Glenn Thompson, Stephen R. McNutt, Kathryn Dorn, David B. Graybeal, Alexandra Farrell, Lori D. Collins, Travis Doering, David Eilers, J. Gonzales, Henok G. Kiflu, Sarah Kruse, Shawn M. Landry, Tonian Robinson, and Garrett T. Speed

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Phage Puppet Masters of the Marine Microbial Realm, Mya Breitbart, Chelsea Bonnain, Kema Malki, and Natalie Sawaya