Marine Science Faculty Publications
Submissions from 2008
Cenozoic Evolution of Larger Benthic Foraminifers: Paleoceanographic Evidence for Changing Habitats, Pamela Hallock
Coral Reefs, Present and Past, on the West Florida Shelf and Platform Margin, Albert C. Hine, Robert B. Halley, Stanley D. Locker, Bret D. Jarrett, Walter C. Jaap, David J. Mallinson, Kate T. Ciembronowicz, Nancy B. Ogden, and David F. Naar
Controls on Coastal Dune Morphology, Shoreline Erosion and Barrier Island Response to Extreme Storms, Chris Houser, Cheryl Hapke, and Stuart Hamilton
Ocean Color Reveals Sand Ridge Morphology on the West Florida Shelf, Chuanmin Hu
Origin and Offshore Extent of Floating Algae in Olympic Sailing Area, Chuanmin Hu and Ming-Xia He
On the Remote Monitoring of Karenia brevis Blooms of the West Florida Shelf, Chuanmin Hu, Remy Luerssen, Frank E. Muller-Karger, Kendall L. Carder, and Cynthia A. Heil
On the Remote Monitoring of Karenia Brevis Blooms of the West Florida Shelf, C. Hu, R. Luerssen, Frank E. Muller-Karger, Kendall L. Carder, and C. Heil
Mexico-U.S. Harmful Algal Bloom Monitoring Efforts, C. Hu and Frank E. Muller-Karger
Anthropogenic Influences on the Dune/beach Morphology of a Moderately Developed Barrier Island: Fire Island, New York, Meredith G. Kratzmann and Cheryl J. Hapke
A Bacterial Metapopulation Adapts Locally to Phage Predation Despite Global Dispersal, Victor Kunin, Shaomei He, Falk Warnecke, S. Brook Peterson, Hector Garcia Martin, Matthew Haynes, Natalia Ivanova, Linda Blackall, Mya Breitbart, Forest Rohwer, Katherine McMahon, and Philip Hugenholtz
Saharan Dust and Phosphatic Fidelity: A Three-Dimensional Biogeochemical Model of Trichodesmium as a Nutrient Source for Red Tides on the West Florida Shelf, J. M. Lenes, B. A. Darrow, John J. Walsh, J. M. Prospero, R. He, Robert H. Weisberg, Gabriel A. Vargo, and C. A. Heil
A Review of Sediment Budget Estimations at Fire Island National Seashore, New York, Erika E. Lentz, Cheryl J. Hapke, and William C. Schwab
Patterns of Upper Layer Circulation Variability in the South China Sea from Satellite Altimetry Using the Self-Organizing Map, Yonggang Liu, Robert H. Weisberg, and Yaochu Yuan
Status of Sensors for Physical Oceanographic Measurements, Mark Luther, Sherryl Gilbert, and Tamburri Tamburri
Spatial and Temporal Variability of SeaWiFS Chlorophyll a Distributions West of the Antarctic Peninsula: Implications for Krill Production, Marina Marrari, Kendra L. Daly, and Chuanmin Hu
Metagenomic Analysis of Lysogeny in Tampa Bay: Implications for Prophage Gene Expression, Lauren D. McDaniel, Mya Breitbart, Jennifer M. Mobberley, Amy Long, Matthew Haynes, Forest Rohwer, and John Paul
A Numerical Simulation of Residual Circulation in Tampa Bay. Part II: Lagrangian Residence Time, Steven D. Meyers and Mark E. Luther
A Three-Dimensional Biophysical Model of Karenia Brevis Dynamics on the West Florida Shelf: a Look at Physical Transport and Potential Zooplankton Grazing Controls, Scott P. Milroy, Dwight A. Dieterle, Ruoying He, Gary J. Kirkpatrick, Kristen M. Lester, Karen A. Steidinger, Gabriel A. Vargo, John J. Walsh, and Robert H. Weisberg
Observations of a Red Sea Fringing Coral Reef under Extreme Environmental Conditions, Z. Moustafa, Pamela Hallock, M. S. Moustafa, and M. Z. Moustafa
In Situ Observations and Satellite Remote Sensing in Seacoos: Program Development and Lessons Learned, James R. Nelson and Robert H. Weisberg
Quantification of Two Decades of Shallow-Water Coral Reef Habitat Decline in the Florida Keys National Marine Sanctuary Using Landsat Data (1984-2002), David A. Palandro, S. Andréfouët, Chuanmin Hu, Pamela Hallock, Frank E. Muller-Karger, P. Dustan, M. K. Callahan, C. Kranenburg, and C. R. Beaver
Assessing the Distribution of Patch Reef Morphologies in the Lower Florida Keys, USA, using IKONOS Satellite Imagery, M. Peters, D. Palandro, Pamela Hallock, and E. Shinn
Back to the Future: A Candidate Ecosystem-Based Solution to the Fisheries Problem, Tony Pitcher and Cameron Ainsworth
Carbonate Factories: A Conundrum in Sedimentary Geology, L. Pomar and Pamela Hallock
Applications of the SEDCON and FORAM Indices on Patch Reefs in Biscayne National Park, FL, USA, A. Ramirez, C. Daniels, and Pamela Hallock
Software Development for Continuous-gas-flow AMS, K. F. von Reden, M. L. Roberts, W. J. Jenkins, B. E. Rosenheim, A. P. McNichol, and R. J. Schneider
Ecological Biogeography of Cephalopod Molluscs in the Atlantic Ocean: Historical and Contemporary Causes of Coastal Diversity Patterns, Rui Rosa, Heidi M. Dierssen, Liliana Gonzalez, and Brad A. Seibel
Large-Scale Diversity Patterns of Cephalopods in the Atlantic Open Ocean and Deep Sea, Rui Rosa, Heidi M. Dierssen, Liliana Gonzalez, and Brad A. Seibel
Synergistic Effects of Climate-related Variables Suggest Future Physiological Impairment in a Top Oceanic Predator, Rui Rosa and Brad A. Seibel
Antarctic Sediment Chronology by Programmed-temperature Pyrolysis: Methodology and Data Treatment, Brad E. Rosenheim, Mary Beth Day, Eugene Domack, Heather Schrum, Albert Benthien, and John M. Hayes
Accelerator Mass Spectrometry 14C Determination in CO2 Produced from Laser Decomposition of Aragonite, Brad E. Rosenheim, Simon R. Thorrold, and Mark L. Roberts
Comment on “An Experimental Study of the Solubility and Speciation of Neodymium (III) Fluoride in F-bearing Aqueous Solutions” by A.A. Migdisov and A.E. Williams-Jones, Johan Schijf and Robert H. Byrne
Seacoos Program Management, Harvey E. Seim, James Nelson, Madilyn Fletcher, C. N. K. Mooers, Lundie Spence, Robert H. Weisberg, Francisco Werner, Sarah M. Smith, and Russ Lea
Changes of Temperature and Bio-optical Properties in the South China Sea in Response to Typhoon Lingling, 2001, Shaoling Shang, Li Li, Fengqin Sun, Jingyu Wu, Chuanmin Hu, Dewen Chen, Xiuren Ning, Yun Qiu, Caiyun Zhang, and Shaoping Shang
High Frequency Radar Observing Systems in SEACOOS: 2002-2007 Lessons Learned, Lynn K. Shay, Harvey E. Seim, David Savidge, Richard Styles, and Robert H. Weisberg
Middle Miocene Ice sheet Dynamics, Deep‐Sea Temperatures, and Carbon Cycling: A Southern Ocean Perspective, Amelia E. Shevenell, James P. Kennett, and David W. Lea
A Comparison of Near-Surface Current Measurement Methods, Eric Siegel, Dennis A. Mayer, and Robert H. Weisberg
The Influence of Temperature on PbCO30 Formation in Seawater, Alan L. Soli, Zachary I. Stewart, and Robert H. Byrne
Natural Egg Mass Deposition by the Humboldt Squid (Dosidicus gigas) in the Gulf of California and Characteristics of Hatchlings and Paralarvae, Danna J. Staaf, Susana Camarillo-Coop, Steven H.D. Haddock, Al C. Nyack, John Payne, Cesar A. Salinas-Zavala, Brad A. Seibel, Lloyd Trueblood, Chad Widmer, and William F. Gilly
Indirect Effects of an Exploited Predator on Recruitment of Coral-Reef Fishes, Christopher D. Stallings
Nonlinear Waves in Zonostrophic Turbulence, Semion Sukoriansky, Nadejda Dikovskaya, and Boris Galperin
Anisotropic Turbulence and Internal Waves in Stably Stratified Flows (QNSE Theory), Semion Sukoriansky and Boris Galperin
Estimating Geocenter Variations from a Combination of GRACE and Ocean Model Output, Sean Swenson, D. Chambers, and John Wahr
Si Cycle in the Cariaco Basin, Venezuela: Seasonal Variability in Silicate Availability and the Si:C:N Composition of Sinking Particles, Robert C. Thunell, Claudia Benitez-Nelson, Frank E. Muller-Karger, Laura Lorenzoni, Mary Scranton, Ramon Varela, Yrene Astor, and Kent A. Fanning
Waves Initiative Within Seacoos, George Voulgaris, Brian K. Haus, Paul Work, Lynn K. Shay, Harvey E. Seim, Robert H. Weisberg, and James R. Nelson
Regional-Scale Seagrass Habitat Mapping in the Wider Caribbean Region Using Landsat Sensors: Applications to Conservation and Ecology, C. C. Wabnitz, S. Andréfouët, D. Torres-Pulliza, Frank E. Muller-Karger, and P. A. Kramer
Satellite Remote Sensing of Surface Oceanic Fronts in Coastal Waters off West–Central Florida, Carrie C. Wall, Frank E. Muller-Karger, Mitchell A. Roffer, Chuanmin M. Hu, Wensheng Yao, and Mark E. Luther
Epilogue to SEACOOS, Robert H. Weisberg
Hurricane Storm Surge Simulations Comparing Three-Dimensional with Two-Dimensional Formulations Based on an Ivan-like Storm over the Tampa Bay, Florida Region, Robert H. Weisberg and Lianyuan Zheng
Assessing the Globally Averaged Sea Level Budget on Seasonal to Interannual Timescales, Josh K. Willis, D. Chambers, and R Steven Nerem
GRACE Observes Small-scale Mass Loss in Greenland, B. Wouters, D. Chambers, and E.J. O. Schrama
Submissions from 2007
High-Resolution In Situ Analysis of Nitrate and Phosphate in the Oligotrophic Ocean, Lori R. Adornato, Eric A. Kaltenbacher, Danielle R. Greenhow, and Robert H. Byrne
Micro- and Macronutrients in the Southeastern Bering Sea: Insight Into Iron-replete and Iron-depleted Regimes, Ana Aguilar-Islas, Matthew Hurst, Kristen N. Buck, Bettina Sohst, Geoffrey Smith, Maeve Lohan, and Kenneth Bruland
Multivariate Reconstruction of Missing Data in Sea Surface Temperature, Chlorophyll, and Wind Satellite Fields, Aida Alvera-Azcarate, Alexander Barth, J. M. Beckers, and Robert H. Weisberg
Climate Change and Invasibility of the Antarctic Benthos, Richard B. Aronson, Sven Thatje, Andrew Clarke, Lloyd S. Peck, Daniel B. Blake, Cheryl D. Wilga, and Brad A. Seibel
Filtering Inertia-Gravity Waves from the Initial Conditions of the Linear Shallow Water Equations, Alexander Barth, Jean-Marie Beckers, Aida Alvera-Azcarate, and Robert H. Weisberg
Calibration of an In Situ Membrane Inlet Mass Spectrometer for Measurements of Dissolved Gases and Volatile Organics in Seawater, Ryan J. Bell, R. T. Short, Friso H. W. van Amerom, and Robert H. Byrne
Exploring the Vast Diversity of Marine Viruses, Mya Breitbart, Luke Thompson, Curtis Suttle, and Matthew Sullivan
The Physicochemical Speciation of Dissolved Iron in the Bering Sea, Alaska, Kristen N. Buck and Kenneth W. Bruland
Dissolved Iron Speciation in Two Distinct River Plumes and an Estuary: Implications for Riverine Iron Supply, Kristen N. Buck, Maeve Lohan, Carolyn J. M. Berger, and Kenneth W. Bruland
A Review of Total Dissolved Copper and Its Chemical Speciation in San Francisco Bay, California, Kristen N. Buck, John R.M. Ross, A. Russell Flegal, and Kenneth W. Bruland
Comment on “Modern-age Buildup of CO2 and Its Effects on Seawater Acidity and Salinity” by Hugo A. Loáiciga, Ken Caldeira, David Archer, James P. Barry, Richard G. Bellerby, Peter G. Brewer, Long Cao, Andrew G. Dickson, Scott C. Doney, Harry Elderfield, Victoria J. Fabry, Richard A. Feely, Jean-Pierre Gattuso, Peter M. Haugan, Ove Hoegh-Guldberg, Atul K. Jain, Joan A. Kleypas, Chris Langdon, James C. Orr, Andy Ridgwell, Christopher L. Sabine, Brad A. Seibel, Yoshihisa Shirayama, Carol Turley, Andrew J. Watson, and Richard E. Zeebe
Development of Stripped-cladding Optical Fiber Sensors for Continuous Monitoring: II: Referencing Method for Spectral Sensing of Environmental Corrosion, Andres M. Cardenas-Valencia, Robert H. Byrne, Melynda Calves, Larry Langebrake, David P. Fries, and Eric T. Steimle
Development of Stripped-cladding Optical Fiber Sensors for Continuous Monitoring: II: Referencing Method for Spectral Sensing of Environmental Corrosion, Andres M. Cardenas-Valencia, Robert H. Byrne, Melynda Calves, Larry Langebrake, David P. Fries, and Eric T. Steimle
Gravimetric Methods – Spacecraft Altimeter Measurements, Don P. Chambers
Effects of Ice Melting on GRACE Observations of Ocean Mass Trends, Don P. Chambers, Mark E. Tamisiea, R Steven Nerem, and John C. Ries
Colored Dissolved Organic Matter in Tampa Bay, Florida, Zhiqiang Chen, Chuanmin Hu, Robyn N. Conmy, Frank E. Muller-Karger, and Peter Swarzenski
Monitoring Turbidity in Tampa Bay Using MODIS/Aqua 250-m Imagery, Zhiqiang Chen, Chuanmin Hu, and Frank E. Muller-Karger
Remote Sensing of Water Clarity in Tampa Bay, Zhiqiang Chen, Frank E. Muller-Karger, and Chuanmin Hu
Monitoring Turbidity in Tampa Bay Using Modis/Aqua 250-M Imagery, Z. Chen, C. Hu, and Frank E. Muller-Karger
Anomalous Features Observed on Tests of Live Archaiasine Foraminifers from the Florida Keys, USA, Heidi Crevison and Pamela Hallock
Chapter 9 Zooplankton Processes in Arctic and Antarctic Polynyas, D. Deibel and Kendra L. Daly
Reconstructing Twentieth-Century Sea Surface Temperature Variability in the Southwest Pacific: A Replication Study Using Multiple Coral Sr/Ca Records from New Caledonia, Kristine L. DeLong, Terrence M. Quinn, and Frederick W. Taylor
Depth-related Trends in Metabolism of Benthic and Benthopelagic Deep-sea Fishes, Jeffrey C. Drazen and Brad A. Seibel
Metagenomic and Small-Subunit rRNA Analyses Reveal the Genetic Diversity of Bacteria, Archaea, Fungi, and Viruses in Soil, Noah Fierer, Mya Breitbart, James Nulton, Catherine Lozupone, Ryan Jones, Michael Robeson, Robert Edwards, Ben Felts, Steve Rayhawk, Rob Knight, Forest Rohwer, and Robert Jackson
Lesion Regeneration Rates in Reef-Building Corals Montastraea spp. as Indicators of Colony Condition, Elizabeth M. Fisher, John E. Fauth, Pamela Hallock-Muller, and Cheryl M. Woodley
Ten Commandments for Ecosystem-Based Fisheries Scientists, Robert C. Francis, Mark A. Hixon, M. Elizabeth Clarke, Steven A. Murawski, and Stephen Ralston
On the Critical Richardson Number in Stably Stratified Turbulence, Boris Galperin, Semion Sukoriansky, and Philip S. Anderson
Evidence for Late Pleistocene Ice Stream Activity in the Witch Ground Basin, Central North Sea, from 3D Seismic Reflection Data, A. G. C. Graham, L. Lonergan, and M. S. Stoker
Long-term and Storm-related Shoreline Change Trends in the Florida Gulf Islands National Seashore, Cheryl J. Hapke and Mark Christiano
National Assessment of Shoreline Change, Part 4: Historical Coastal Cliff Retreat Along the California Coast, Cheryl J. Hapke and David Reid
Satellite-Derived Surface Current Divergence in Relation to Tropical Atlantic SST and Wind, Robert W. Helber, Robert H. Weisberg, Fabrice Bonjean, Eric S. Johnson, and Gary S. Lagerloef
Response of Sea Surface Properties to Hurricane Dennis in the Eastern Gulf of Mexico, C. Hu and Frank E. Muller-Karger
Phytoplankton Carbon Fixation Gene (RuBisCO) Transcripts and Air-sea CO2 Flux in the Mississippi River Plume, David E. John, Zhaohui A. Wang, Xuewu Liu, Robert H. Byrne, Jorge E. Corredor, José M. López, Alvaro Cabrera, Deborah A. Bronk, F Robert Tabita, and John H. Paul
Validation and Error Analysis of OSCAR Sea Surface Currents, Eric S. Johnson, Fabrice Bonjean, Gary S. E. Lagerloef, John T. Gunn, and Gary T. Mitchum
Developing Standards for Dissolved Iron in Seawater, Kenneth Johnson, Virginia Elrod, Steve Fitzwater, Joshua Plant, Edward Boyle, Bridget Bergquist, and Kristen N. Buck
Power Law Rank–abundance Models for Marine Phage Communities, Karl Heinz Karl, Beltran Rodriguez-Brito, Mya Breitbart, David Bangor, Florent Angly, Ben Felts, James Nulton, Forest Rohwer, and Peter Salamon
Euphotic Zone Depth: Its Derivation and Implication to Ocean-Color Remote Sensing, ZhongPing Lee, Alan Weidemann, John Kindle, Robert Arnone, Kendall L. Carder, and Curtiss Davis
Rectification of the Bias in the Wavelet Power Spectrum, Yonggang Liu, X. San Liang, and Robert H. Weisberg
Ocean Currents and Sea Surface Heights Estimated Across the West Florida Shelf, Yonggang Liu and Robert H. Weisberg
Current Patterns on the West Florida Shelf from Joint Self-Organizing Map Analyses of Hf Radar and Adcp Data, Yonggang Liu, Robert H. Weisberg, and Lynn K. Shay
Nummulites, A. R. Loeblich Jr. and Pamela Hallock
Macroarray Analysis of Gene Expression in a Marine Pseudotemperate Bacteriophage, Amy Long, Stacey S. Patterson, and John H. Paul
The Influence of Ionic Strength on Yttrium and Rare Earth Element Complexation by Fluoride Ions in NaClO4, NaNO3 and NaCl Solutions at 25 °C, Yu-Ran Luo and Robert H. Byrne
Water Level Observations for Storm Surge, Mark E. Luther, Clifford Ronald Merz, Jeffrey Scudder, Stephen R. Baig, Jennifer Pralgo, Stephen Gill, and Gerald Hovis
On the Attraction of Larval Fishes to Reef Sounds, David A. Mann, Brandon M. Casper, Kelly S. Boyle, and Timothy C. Tricas
Modern Climate Forcing of Terrigenous Deposition in the Tropics (Cariaco Basin, Venezuela), N. C. Martinez, R. W. Murray, R. C. Thunell, L. C. Peterson, Frank E. Muller-Karger, Y. Astor, and R. Varela
Velocity Comparisons from Upward and Downward Acoustic Doppler Current Profilers on the West Florida Shelf, Dennis A. Mayer, Jyotika I. Virmani, and Robert H. Weisberg
Sea Level, M. Merrifield, G. T. Mitchum, S. Gill, and P. Woodworth
Development of a Self-Contained, Satellite Based, Moored Surface Buoy Position Tracking Device, Clifford R. Merz, Robert H. Weisberg, Patrick A. Smith, Jason A. Law, Jeff Donovan, Graham M. Tilbury, Chad Lembke, and Douglass Myhre
