Marine Science Faculty Publications
Submissions from 2011
Coastal Ocean Pollution, Water Quality, and Ecology, Robert H. Weisberg
Shoreline Changes in West-Central Florida between 1987 and 2008 from Landsat Observations, K. Yu, C. Hu, Frank E. Muller-Karger, D. Lu, and I. Soto
Evolution of a Coastal Upwelling Event during Summer 2004 in the Southern Taiwan Strait, Caiyun Zhang, Huasheng Hong, Chuanmin Hu, and Shaoling Shang
Submissions from 2010
In Situ Nutrient Sensors for Ocean Observing Systems, Lori Adornato, Andres Cardenas-Valencia, Eric Kaltenbacher, Robert H. Byrne, Kendra L. Daly, Kate Larkin, Sue Hartman, Matt Mowlem, Ralf D. Prien, and Veronique Garcon
A Statistical Approach for Estimating Fish Diet Compositions from Multiple Data Sources: Gulf of California Case Study, Cameron H. Ainsworth, Isaac C. Kaplan, Phillip S. Levin, and Marc Mangel
Transposases Are the Most Abundant, Most Ubiquitous Genes in Nature, Ramy Aziz, Mya Breitbart, and Robert Edwards
Assessment of the Jason-2 Extension to the TOPEX/Poseidon, Jason-1 Sea-Surface Height Time Series for Global Mean Sea Level Monitoring, B. D. Beckley, N. P. Zelensky, S. A. Holmes, F. G. Lemoine, R. D. Ray, G. T. Mitchum, S. D. Desai, and S. T. Brown
Iron-binding Ligand Production and Copper Speciation in an Incubation Experiment of Antarctic Peninsula Shelf Waters From the Bransfield Strait, Southern Ocean, Kristen N. Buck, Karen Selph, and Katherine Barbeau
Partitioning of Food Resources in Bathypelagic Micronekton in the Eastern Gulf of Mexico, Scott E. Burghart, Thomas L. Hopkins, and Joseph J. Torres
Sensors and Systems for in situ Observations of Marine Carbon Dioxide System Variables, R. H. Byrne, M. D. DeGrandpre, R. Timothy Short, Todd R. Martz, Liliane Merlivat, Craig McNeil, Fred L. Sayles, Ryan Bell, and Peer Fietzek
Comparative Carbonate and Hydroxide Complexation of Cations in Seawater, Robert H. Byrne
Direct Observations of Basin-wide Acidification of the North Pacific Ocean, Robert H. Byrne, Sabine Mecking, Richard A. Feely, and Xuewu Liu
Complexation of Pb(II) by Chloride Ions in Aqueous Solutions, Robert H. Byrne, Wensheng Yao, Yanxin Luo, and Frank J. Millero
Ocean Mass from GRACE and Glacial Isostatic Adjustment, D. Chambers, John Wahr, Mark E. Tamisea, and R Steven Nerem
A Global Evaluation of Ocean Bottom Pressure from GRACE, OMCT, and Steric-Corrected Altimetry, D. Chambers and Josh K. Willis
Short-Term Variability of Suspended Sediment and Phytoplankton in Tampa Bay, Florida: Observations from a Coastal Oceanographic Tower and Ocean Color Satellites, Zhiqiang Chen, Chuanmin M. Hu, Frank E. Muller-Karger, and Mark E. Luther
Short-Term Variability of Suspended Sediment and Phytoplankton in Tampa Bay, Florida: Observations from a Coastal Oceanographic Tower and Ocean Color Satellites, Z. Chen, C. Hu, Frank E. Muller-Karger, and E. E. Luther
Self-recruitment and Sweepstakes Reproduction Amid Extensive Gene Flow in a Coral-reef Fish, Mark R. Christie, Darren W. Johnson, Christopher D. Stallings, and Mark A. Hixon
Sea-Level Rise and Variability: Synthesis and Outlook for the Future, John A. Church, Thorkild Aarup, Philip L. Woodworth, W. Stanley Wilson, Robert J. Nicholls, Ralph Rayner, Kurt Lambeck, Gary T. Mitchum, Konrad Steffen, Anny Cazenave, Geoff Blewitt, Jerry X. Mitrovica, and Jason A. Lowe
Ocean Temperature and Salinity Contributions to Global and Regional Sea-Level Change, John A. Church, Dean Roemmich, Catia M. Domingues, Josh K. Willis, Neil J. White, John E. Gilson, Detlef Stammer, Armin Köhl, Don P. Chambers, Felix W. Landerer, Jochem Marotzke, Jonathan M. Gregory, Tatsuo Suzuki, Anny Cazenave, and Pierre-Yves Le Traon
A Preliminary Carbon Budget for the Gulf of Mexico, Paula G. Coble, Lisa L. Robbins, Kendra L. Daly, Wei-Jun Cai, Katja Fennel, and Steven E. Lorenz
Low Oxygen Regions in the Oceans, Kendra L. Daly, Francis Chan, and Nancy Rabalais
Characteristics of Chromophoric Dissolved Organic Matter in the Nearshore Waters of the Western Taiwan Strait, Cuifen Du, Shaoling Shang, Qiang Dong, Chuanmin Hu, and Jingyu Wu
Nickel Utilization in Phytoplankton Assemblages From Contrasting Oceanic Regimes, Christopher Dupont, Kristen N. Buck, Brian Palenik, and Katherine Barbeau
Ecological Impacts of the 2005 Red Tide on Artificial Reef Epibenthic Macroinvertebrate and Fish Communities in the Eastern Gulf of Mexico, Jennifer M. Dupont, Pamela Hallock-Muller, and Walter C. Jaap
Monitoring Coral Reefs from Space, C. M. Eakin, C. J. Nim, R. E. Brainard, C. Aubrecht, C. Elvidge, D. K. Gledhill, Frank E. Muller-Karger, P. J. Mumby, W. J. Skirving, A. E. Strong, M. Wang, S. Weeks, F. Wentz, and D. Ziskin
Geophysical Flows with Anisotropic Turbulence and Dispersive Waves: Flows with Stable Stratification, Boris Galperin and Semion Sukoriansky
Geophysical Flows with Anisotropic Turbulence and Dispersive Waves: Flows with a Β-effect, Boris Galperin, Semion Sukoriansky, and Nadejda Dikovskaya
Flow and Retreat of the Late Quaternary Pine Island-Thwaites Palaeo-ice Stream, West Antarctica, Alastair G. C. Graham, Robert D. Larter, Karsten Gohl, Julian A. Dowdeswell, Claus-Dieter Hillenbrand, James A. Smith, Jeffrey Evans, Gerhard Kuhn, and Tara Deen
Depositional Environments and Chronology of Late Weichselian Glaciation and Deglaciation in the Central North Sea, Alastair G. C. Graham, Lidia Lonergan, and Martyn S. Stoker
West Florida Shelf: A Natural Laboratory for the Study of Ocean Acidification, Pamela Hallock, Lisa L. Robbins, Rebekka Larson, Tanya Beck, Patrick Schwing, Michael Martínez-Colón, and Brad Gooch
A Review of Sediment Budget Imbalances along Fire Island, New York: Can Nearshore Geologic Framework and Patterns of Shoreline Change Explain the Deficit?, Cheryl J. Hapke, Erika E. Lentz, Paul T. Gayes, Clayton A. McCoy, Rachel Hehre, William C. Schwab, and S. Jeffress Williams
Predicting Coastal Cliff Erosion using a Bayesian Probabilistic Model, Cheryl Hapke and Nathaniel Plant
Lagrangian Particle Tracking of a Toxic Dinoflagellate Bloom within the Tampa Bay Estuary, Heather Havens, Mark E. Luther, Steven D. Meyers, and Cynthia A. Heil
The Sedimentary Legacy of a Palaeo-ice Stream on the Shelf of the Southern Bellingshausen Sea: Clues to West Antarctic Glacial History during the Late Quaternary, C.-D. Hillenbrand, R. D. Larter, J. A. Dowdeswell, W. Ehrmann, C. Ó Cofaigh, S. Benetti, A. G. C. Graham, and H. Grobe
Coupling of Surge and Waves for an Ivan-like Hurricane Impacting the Tampa Bay, Florida Region, Yong Huang, Robert H. Weisberg, and Lianyuan Zheng
Remote Detection of Trichodesmium Blooms in Optically Complex Coastal Waters: Examples with Modis Full-Spectral Data, C. Hu, Jennifer Cannizzaro, Kendall L. Carder, Frank E. Muller-Karger, and R. Hardy
Moderate Resolution Imaging Spectroradiometer (MODIS) Observations of Cyanobacteria Blooms in Taihu Lake, China, Chuanmin Hu, Zhongping Lee, Ronghua Ma, Kun Yu, Daqiu Li, and Shaoling Shang
On the Recurrent Ulva prolifera Blooms in the Yellow Sea and East China Sea, Chuanmin Hu, Daqiu Li, Changsheng Chen, Jianzhong Ge, Frank E. Muller-Karger, Junpeng Liu, Feng Yu, and Ming-Xia He
Introduction to SeaWiFS/MODIS Chlorophyll Data Products and Data Analysis Tools, Chuanmin Hu, I.-I. Lin, and Chun-Chi Lien
Poles Apart: The “Bipolar” Pteropod Species Limacina Helicina Is Genetically Distinct Between the Arctic and Antarctic Oceans, Brian Hunt, Jan Strugnell, Nina Bednarsek, Katrin Linse, R. John Nelson, Evgeny Pakhomov, Brad Seibel, Dirk Steinke, and Laura Würzberg
Hydrological and Oceanic Effects on Polar Motion from GRACE and Models, Shaunggen Jin, Don Chambers, and Byron D. Tapley
Hypothesis for Mega-outburst Flooding from a Palaeo-subglacial Lake Beneath the East Antarctic Ice Sheet, T. A. Jordan, F. Ferraccioli, H. Corr, A. Graham, E. Armadillo, and E. Bozzo
Cephalopod Species Richness in the Wider Caribbean Region, Heather L. Judkins, Michael Vecchione, Clyde F. E. Roper, and Joseph Torres
The Formation of Multiple Squall Lines and the Impacts of WSR-88D Radial Winds in a WRF Simulation, Haldun Karan, Patrick J. Fitzpatrick, Christopher M. Hill, Yongzuo Li, Qingnong Xiao, and Eunha Lim
Land-based Nutrient Enrichment of the Buccoo Reef Complex and Fringing Coral Reefs of Tobago, West Indies, Brian E. Lapointe, Richard Langton, Bradley J. Bedford, Arthur C. Potts, Owen Day, and Chuanmin Hu
The Universal Ratio of Boron to Chlorinity for the North Pacific and North Atlantic Oceans, Kitack Lee, Tae-Wook Kim, Robert H. Byrne, Frank J. Millero, Richard A. Feely, and Yong-Ming Liu
Uncertainties of Optical Parameters and their Propagations in an Analytical Ocean Color Inversion Algorithm, ZhongPing Lee, Robert Arnone, Chuanmin Hu, P. Jeremy Werdell, and Bertrand Lubac
Global Shallow—Water Bathymetry From Satellite Ocean Color Data, ZhongPing Lee, Chuanmin Hu, Brandon Casey, Shaoling Shang, Heidi Dierssen, and Robert Arnone
Time Series of Bio-Optical Properties in a Subtropical Gyre: Implications for the Evaluation of Interannual Trends of Biogeochemical Properties, ZhongPing Lee, Shaoling Shang, Chuanmin Hu, Marlon Lewis, Robert Arnone, Yonghong Li, and Bertrand Lubac
Calibration of TOPEX/Poseidon and Jason Altimeter Data to Construct a Continuous Record of Mean Sea Level Change, Eric W. Leuliette, R. Steven Nerem, and Gary T. Mitchum
Presence of Harbour Seals (Phoca vitulina) May Increase Exploitable Fish Biomass in the Strait of Georgia, Lingbo Li, Cameron Ainsworth, and Tony Pitcher
HF Radar Performance in a Low-Energy Environment: CODAR SeaSonde Experience on the West Florida Shelf, Yonggang Liu, Robert H. Weisberg, and Clifford R. Merz
A Half-century of Changes in China's Lakes: Global Warming or Human Influence?, Ronghua Ma, Hongtao Duan, Chuanmin Hu, Xuezhi Feng, Ainong Li, Weimin Ju, Jiahu Jiang, and Guishan Yang
Preliminary Survey on Foraminiferal Responses to Pollutants in Torrecillas Lagoon Puerto Rico, Michael Martínez-Colón and Pamela Hallock
Local and Regional Geochemical Signatures of Surface Sediments from the Cariaco Basin and Orinoco Delta, Venezuela, N. C. Martinez, R. W. Murray, R. C. Thunell, L. C. Peterson, Frank E. Muller-Karger, Laura Lorenzoni, Y. Astor, and R. Varela
Sea Level Variations, M. A. Merrifield, S. Gill, E. Leuliette, L. Miller, G. T. Mitchum, S. Nerem, and P. Woodworth
Modern Sea-Level-Change Estimates, Gary T. Mitchum, R. Steven Nerem, Mark A. Merrifield, and W. Roland Gehrels
Using the Surface Reflectance Modis Terra Product to Estimate Turbidity in Tampa Bay, Florida, M. J. Moreno-Madrinan, M. Z. Al-Hamdan, D. L. Rickman, and Frank E. Muller-Karger
The Cariaco Basin: CARIACO Oceanographic Time Series, Frank E. Muller-Karger, Ramon Varela, Robert C. Thunell, Mary I. Scranton, Gordon T. Taylor, Yrene Astor, C. R. Benitez-Nelson, Laura Lorenzoni, Kent A. Fanning, Eric Tappa, Miguel A. Goni, Digna Rueda, and Chuanmin Hu
The College of Marine Science at the University of South Florida, Frank Muller-Karger, Kent Fanning, Albert Hine, William Hogarth, and Jacqueline Dixon
Rebuilding Depleted Fish Stocks: the Good, the Bad, And, Mostly, the Ugly, Steven A. Murawski
Why Compare Marine Ecosystems?, Steven A. Murawski, John H. Steele, Phillip Taylor, Michael J. Fogarty, Michael P. Sissenwine, Michael Ford, and Cynthia Suchman
Estimating Mean Sea Level Change from the TOPEX and Jason Altimeter Missions, R. S. Nerem, Don P. Chambers, C. Choe, and Gary T. Mitchum
Resilience to Change in Two Coastal Communities: Using the Maximum Dexterity Fleet, Tony J. Pitcher and Cameron H. Ainsworth
Viral and Microbial Community Dynamics in Four Aquatic Environments, Beltran Rodriguez-Brito, LinLin Li, Linda Wegley, Mike Furlan, Florent Angly, Mya Breitbart, John Buchanan, Christelle Desnues, Elizabeth Dinsdale, and Robert Edwards
Metabolic Physiology of the Humboldt Squid, Dosidicus gigas: Implications for Vertical Migration in a Pronounced Oxygen Minimum Zone, Rui Rosa and Brad A. Seibel
Slow Pace of Life of the Antarctic Colossal Squid, Rui Rosa and Brad A. Seibel
Voyage of the Argonauts in the Pelagic Realm: Physiological and Behavioural Ecology of the Rare Paper Nautilus, Argonauta nouryi, Rui Rosa and Brad A. Seibel
Identifying Thresholds for Ecosystem-Based Management, Jameal F. Samhouri, Phillip S. Levin, and Cameron H. Ainsworth
A radiogeochemical, land-use archive of the Manatee River Watershed, FL, Patrick Schwing, Ashanti Johnson, and Charles W. Holmes
The Presence of Polynyas in the Weddell Sea during the Last Glacial Period with Implications for the Reconstruction of Sea-ice Limits and Ice Sheet History, James A. Smith, Claus-Dieter Hillenbrand, Carol J. Pudsey, Claire S. Allen, and Alastair G. C. Graham
Shell Anomalies Observed in a Population of Archaias Angulatus (Foraminifera) from the Florida Keys (USA) Sampled in 1982-83 and 2006-07, Heidi C. Souder, Bryan McCloskey, Pamela Hallock, and Robert H. Byrne
Experimental Test of Preference by a Predatory Fish for Prey at Different Densities, Christopher D. Stallings
Energy Allocation in Juveniles of a Warm-temperate Reef Fish, Christopher D. Stallings, Felicia C. Coleman, Christopher C. Koenig, and Daniel A. Markiewicz
Metagenomic Sequencing for Virus Identification in a Public-health Setting, Sanela Svraka, Karyna Rosario, Erwin Duizer, Harrie van der Avoort, Mya Breitbart, and Marion Koopmans
The 13C Suess Effect in Scleractinian Corals Mirror Changes in the Anthropogenic CO2 Inventory of the Surface Oceans, Peter K. Swart, Lisa Greer, Brad E. Rosenheim, Chris S. Moses, Amanda J. Waite, A. Winter, Richard E. Dodge, and Kevin Helmle
Satellite-based Global-ocean Mass Balance Estimates of Interannual Variability and Emerging Trends in Continental Freshwater Discharge, Tajdarul H. Syed, James S. Famiglietti, Don P. Chambers, Josh K. Willis, and Kyle Hilburn
Illegal, Unreported and Unregulated Fisheries Catch in Raja Ampat Regency, Eastern Indonesia, Divya A. Varkey, Cameron H. Ainsworth, Tony J. Pitcher, Yohanis Goram, and Rashid Sumaila
Measuring Progress Toward Global Marine Conservation Targets, C. C. Wabnitz, S. Andréfouët, and Frank E. Muller-Karger
Deglacial Abrupt Climate Change in the Atlantic Warm Pool: A Gulf of Mexico Perspective, Carlie Williams, Benjamin P. Flower, David W. Hastings, Thomas P. Guilderson, Kelly A. Quinn, and Ethan A. Goddard
Global Sea Level Rise: Recent Progress and Challenges for the Decade to Come, Josh K. Willis, Don P. Chambers, C. K. Shum, and Chung-Yen Kuo
An Intercomparison of GPS RO Retrievals with Colocated Analysis and In Situ Observations within Tropical Cyclones, Henry R. Winterbottom and Qingnong Xiao
Analysis of Seasonal Ocean Bottom Pressure Variability in the Gulf of Thailand from GRACE, B. Wouters and Don P. Chambers
Rookery Bay and Naples Bay Circulation Simulations: Applications to Tides and Fresh Water Inflow Regulation, Lianyuan Zheng and Robert H. Weisberg
Submissions from 2009
A Bioeconomic Optimization Approach for Rebuilding Marine Communities: British Columbia Case Study, C. H. Ainsworth and T. J. Pitcher
A Nested Model of the Cariaco Basin (Venezuela): Description of the Basin'S Interior Hydrography and Interactions with the Open Ocean, Aida Alvera-Azcarate, Alexander Barth, and Robert H. Weisberg
The Surface Circulation of the Caribbean Sea and the Gulf of Mexico as Inferred from Satellite Altimetry, Aida Alvera-Azcarate, Alexander Barth, and Robert H. Weisberg
Genomic Analysis of Multiple Roseophage SIO1 Strains, Florent Angly, Merry Youle, Bahador Nosrat, Shailaja Srinagesh, Beltran Rodriguez‐Brito, Patrick McNairnie, Gordafaried Deyanat‐Yazdi, Mya Breitbart, and Forest Rohwer
Larger Foraminifers of the Florida Reef Tract, USA: Distribution Patterns on Reef-Rubble Habitats, Rebekah D. Baker, Pamela Hallock, Elizabeth F. Moses, Dana E. Williams, and Alexa Ramirez
The Framework of a Coastal Hazards Model—A Tool for Predicting the Impact of Severe Storms, Patrick L. Barnard, Bill O'Reilly, Maarten van Ormondt, Edwin Elias, Peter Ruggiero, Li H. Erikson, Cheryl Hapke, Brian D. Collins, Robert T. Guza, Peter N. Adams, and Julie Thomas
Dynamically Constrained Ensemble Perturbations - Application to Tides on Thewest Florida Shelf, Alexander Barth, Aida Alvera-Azcarate, J. M. Beckers, Robert H. Weisberg, L. Vandenbulcke, F. Lenartz, and M. Rixen
Dynamically Constrained Ensemble Perturbations: Application to Tides on the West Florida Shelf, Alexander Barth, Aida Alvera-Azcarate, J. M. Beckers, Robert H. Weisberg, L. Vandenbulcke, F. Lenartz, and M. Rixen
Frequent Detection of Highly Diverse Variants of Cardiovirus, Cosavirus, Bocavirus, and Circovirus in Sewage Samples Collected in the United States, O. Blinkova, Karyna Rosario, A. Kapoor, B. Slikas, F. Bernardin, Mya Breitbart, and E. Delwart
Comparison of Inherent Optical Properties as Surrogate for Particulate Matter Concentration in Coastal Waters, Emmanuel Boss, Lisa Taylor, Sherryl Gilbert, Kjell Gundersen, Nathan Hawley, Carol Janzen, Tom Johengen, Heidi Purcell, Charles Robertson, Daniel Schar, G. Jason Smith, and Mario Tamburri
Metagenomic and Stable Isotopic Analyses of Modern Freshwater Microbialites in Cuatro Ciénegas, Mexico, Mya Breitbart, Ana Maria Hoare, Anthony G. Nitti, Janet Siefert, Matthew Haynes, Elizabeth Dinsdale, Robert Edwards, Valeria Souza, Forest Rohwer, and David Hollander
Building Links with the Fishing, Aquaculture and Management Communities, Alida Bundy, Gary Borstad, John Field, Steve Groom, Nicolas Hoepffner, Chuanmin Hu, Vivian Lutz, and Cara Wilson
Surface and Subsurface Geostrophic Current Variability in the Indian Ocean From Altimetry, Dara D. H. Cadden, Bulusu Subrahmanyam, D. Chambers, and V.S. N. Murty
Detection of Karenia Brevis Blooms on the West Florida Shelf Using in Situ Backscattering and Fluorescence Data, Jennifer P. Cannizzaro, C. Hu, D. C. English, Kendall L. Carder, C. Heil, and Frank E. Muller-Karger
Foraminiferal Assemblages in Biscayne Bay, Florida, USA: Responses to Urban and Agricultural Influence in a Subtropical Estuary, Elizabeth A. Carnahan, A. M. Hoare, Pamela Hallock, Barbara H. Lidz, and Christopher D. Reich
