Document Type
Article
Publication Date
2-1-2019
Digital Object Identifier (DOI)
https://doi.org/10.1016/j.dib.2019.01.011
Abstract
Red drum (Sciaenops ocellatus) is an estuarine Sciaenid with high commercial value and recreational demand. During the past 50 years, overfishing has caused declines in the population that resulted in the development of red drum commercial and stock enhancement aquaculture fisheries. Despite the potential high economic value in both wild and aquaculture commercial fisheries the availability of transcriptomic data for red drum in public databases is limited. The data here represents the transcriptome profiles of three tissues: liver, testis and head kidney from red drum. The data was generated using Illumina high-throughput RNA sequencing, Trinity for de novo assembly and Blast2GO for annotation. Six individual libraries were pooled for sequencing of the transcriptome and the raw fastq reads have been deposited in the NCBI-SRA database (accession number SRP11690).
Rights Information
This work is licensed under a Creative Commons Attribution 4.0 License.
Was this content written or created while at USF?
No
Citation / Publisher Attribution
Data in Brief, v. 22, p. 934-939
Scholar Commons Citation
Sherwood, Tracy A.; Main, Kevan L.; and Wetzel, Dana L., "De Novo Assembly and Transcriptome Dataset of Liver, Testis and Head Kidney from Red Drum (Sciaenops ocellatus)" (2019). C-IMAGE Publications. 68.
https://digitalcommons.usf.edu/cimage_pubs/68
Comments
Data used in this article are available for download.
RNA-seq transcriptome characterization of liver, gonad, and head kidney from control and intraperitoneal oil-injected sub-adult male red drum