Green Archiving For USF Faculty: Getting Started

  1. Update your CV to include all work completed since arriving at USF.
  2. Write a short email giving us permission to post your research. We will seek copyright permission to post the digital item(s).
  3. Attach your CV and send the email to: scholarcommons@usf.edu

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Submissions from 2017

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Effects of Linear Filter on Stability and Performance of Human-in-the-Loop Model Reference Adaptive Control Architectures, Ehsan Yousefi, Didem Fatma Demir, Rifat Sipahi, Tansel Yucelen, and Yildiray Yildiz

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Impacts of Compact Growth and Electric Vehicles on Future Air Quality and Urban Exposures may be Mixed, Haofei Yu and Amy L. Stuart

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Pathogenic Conversion of Coagulase-negative Staphylococci, Wenqi Yu, Hwan Keun Kim, Sabine Rauch, Olaf Schneewind, and Dominique Missiakas

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Protective Effects of Household-Based TB Interventions Are Robust to Neighbourhood-Level Variation in Exposure Risk in Lima, Peru: A Model-Based Analysis, Jon Zelner, Megan B. Murray, Mercedes C. Becerra, Jerome T. Galea, Leonid Lecca, Roger Calderon, Rosa Yataco, Zibiao Zhang, and Ted Cohen

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Incorporating Demand Dynamics in Multi-Period Capacitated Fast-Charging Location Planning for Electric Vehicles, Anpeng Zhang, Jee Eun Kang, and Changhyun Kwon

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Platinum(II)-Based Convex Trigonal-Prismatic Cages via Coordination-Driven Self-Assembly and C60 Encapsulation, Mingming Zhang, Hongchuang Xu, Ming Wang, Manik Lal Saha, Zhixuan Zhou, Xuzhou Yan, Heng Wang, Xiaopeng Li, Feihe Huang, Nengfang She, and Peter J. Stang

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Atmospheric Correction of Hyperspectral Airborne GCAS Measurements Over the Louisiana Shelf Using a Cloud Shadow Approach, Minwei Zhang, Chuanmin Hu, Matthew G. Kowalewski, Scott J. Janz, Zhongping Lee, and Jianwei Wei

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Challenges in Methane Column Retrievals from AVIRIS-NG Imagery Over Spectrally Cluttered Surfaces: A Sensitivity Analysis, Minwei Zhang, Ira Leifer, and Chuanmin Hu

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Permafrost Organic Carbon Mobilization From the Watershed to the Colville River Delta: Evidence From 14C Ramped Pyrolysis and Lignin Biomarkers, Xiaowen Zhang, Thomas S. Bianchi, Xingqian Cui, Brad E. Rosenheim, Chien-Lu Ping, Andrea J. M. Hanna, Mikhail Kanevskiy, Kathryn M. Schreiner, and Mead A. Allison

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Importance of Lateral Flux and Its Percolation Depth on Organic Carbon Export in Arctic Tundra Soil: Implications from a Soil Leaching Experiment, Xiaowen Zhang, Jack A. Hutchings, Thomas S. Bianchi, Yina Liu, Ana Arellano, and Edward A. Schuur

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A Unified Inverse Scattering Transformation for the Local and Nonlocal Nonautonomous Gross-Pitaevskii Equations, Yu-Juan Zhang, Dun Zhao, and Wen-Xiu Ma

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Reassessment of Different Criteria for Diagnosing Post-hepatectomy Liver Failure: a Single-center Study of 1683 Hepatectomy, Yongchang Zheng, Huayu Yang, Li He, Yilei Mao, Yilei Mao, Hanze Zhang, Haitao Zhao, Shunda Du, Yiyao Xu, Tianyi Chi, Haifeng Xu, Xin Lu, Xinting Sang, and Shouxian Zhong

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Complexiton Solutions to Soliton Equations by the Hirota Method, Yuan Zhou and Wen-Xiu Ma

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MWPCR: Multiscale Weighted Principal Component Regression for High-Dimensional Prediction, Hongtu Zhu, Dan Shen, Xuewei Peng, and Leo Yufeng Liu

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Binder-Jet Printing of Fine Stainless Steel Powder with Varied Final Density, Mohsen Ziaee, Eric M. Tridas, and Nathan B. Crane

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Development of an Adverse Drug Reaction Corpus from Consumer Health Posts, Maryam Zolnoori, Timothy B. Patrick, Kin Wah Fung, Anthony Faiola, Yi Shuan Shirley Wu, Jiaxi Zhu, and Christina Eldredge

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Therapeutic Alliance and Adherence to a Plant-based Eating Plan to Treat Chronic Disease, Michiel A. Zyl, Lesley M. Harris, and Rachel Hale

Submissions from 2016

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Distributions and Accumulation Rates of Polycyclic Aromatic Hydrocarbons in the Northern Gulf of Mexico Sediments, Puspa L. Adhikari, Kanchan Maiti, Edward B. Overton, Brad E. Rosenheim, and Brian D. Marx

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Development of a Portable Carbon System Sensor for Ocean Acidification Research, Lori Adornato, Eric Kaltenbacher, Robert H. Byrne, Xuewu Liu, and Jonathan Sharp

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Performing Resilience Labor to Reintegrate After Disaster, Vinita Agarwal and Patrice M. Buzzanell

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Fault Diagnosis Schemes for Secure Lightweight Cryptographic Block Cipher RECTANGLE Benchmarked on FPGA, Anita Aghaie, Mehran Mozaffari Kermani, and Reza Azarderakhsh

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Masking Mentorship: Critical (Race) Care among Black Males in Special Education, Vonzell Agosto and Roderick James Jones

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Critical Race Media Literacy and Critical Incidents of Retreating to Teachable Moments, Vonzell Agosto, Zorka Karanxha, and Deirdre Cobb-Roberts

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Cyber Insurance at USF, Manish Agrawal and Shivendu Shivendu

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Temporal Variability of Reactive Iron Over the Gulf of Alaska Shelf, Ana M. Aguilar-Islas, Marie J.M. Séguret, Robert Rember, Kristen N. Buck, Peter Proctor, Calvin W. Mordy, and Nancy B. Kachel

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Validation of an Improved Helical Diode Array and Dose Reconstruction Software Using TG‐244 Datasets and Stringent Dose Comparison Criteria, Saeed Ahmed, Benjamin Nelms, Jakub Kozelka, Geoffrey Zhang, Eduardo Moros, and Vladimir Feygelman

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Current Status of Marker Genes of Bacteroides and Related Taxa for Identifying Sewage Pollution in Environmental Waters, Warish Ahmed, Bridie Hughes, and Valerie J. Harwood

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Nutritional Status and Tuberculosis Risk in Adult and Pediatric Household Contacts, Omowunmi Aibana, Xeno Acharya, Chuan-Chin Huang, Mercedes C. Becerra, Jerome T. Galea, Silvia S. Chiang, Carmen C. Contreras, Roger Calderon, Rosa Yataco, Gustavo E. Velásquez, Karen Tintaya, Judith Jimenez, Leonid Lecca, and Megan B. Murray

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Geography and Environment of the Yoruba, Fenda A. Akiwumi

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The New Kid on the Old Block: Coltan, Conflict-Prone Minerals, and Post-War Reconstruction in Sierra Leone, Fenda A. Akiwumi and Arthur O. Hollist

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On Event-Triggered Adaptive Architectures for Decentralized and Distributed Control of Large-Scale Modular Systems, Ali Albattat, Benjamin C. Gruenwald, and Tansel Yucelen

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Reconstruction of Total Grain Size Distribution of the Climactic Phase of a Long-Lasting Eruption: The Example of the 2008–2013 Chaitén Eruption, Fabrizio Alfano, Costanza Bonadonna, Sebastian Watt, Charles B. Connor, Alain Volentik, and David M. Pyle

Algebra: Big Ideas, Barriers, and Effective Practices for Students with Disabilities, David Allsopp, Sarah van Ingen, O. Simsek, and K. Haley

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Resistivity Soundings and VLF Profiles for Siting Groundwater Wells in a Fractured Basement Aquifer in the Arabian Shield, Saudi Arabia, A. I. Ammar and Sarah Kruse

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Participation-Related Factors Influencing Performance in Four Urban-Based Community-Operated Water Schemes in Kisumu, Kenya, Erick O. Ananga, Ambe J. Njoh, Julius Y. Anchang, and Fenda Akiwumi

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An Efficient Unsupervised Index Based Approach for Mapping Urban Vegetation from IKONOS Imagery, Julius Y. Anchang, Erick O. Ananga, and Ruiliang Pu

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Portuguese Studies on Medieval Illuminated Manuscripts, David Arbesu

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Multiscale Measurement Error Models for Aggregated Small Area Health Data, Mehreteab Aregay, Andrew B. Lawson, Christel Faes, Russell S. Kirby, Rachel Carroll, and Kevin Watjou

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An Efficient Scheme for Numerical Solution of Burgers’ Equation Using Quintic Hermite Interpolating Polynomials, Shelly Arora and Inderpreet Kaur

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Volcanic Hazard Assessments for Nuclear Installations: Methods and Examples in Site Evaluation, W. P. Aspinall, Sylvain J. Charbonnier, Charles B. Connor, Laura Connor, A. Costa, L. M. Courtland, H. Delgado Granados, A. Godoy, K. Hibino, B. E. Hill, J. C. Komorowski, and Stephen R. McNutt

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Quantitative proteomic profiling reveals hepatic lipogenesis and liver X receptor activation in the PANDER transgenic model., Mark G. Athanason, Whitney A. Ratliff, Dale Chaput, Catherine B. MarElia, Melanie N. Kuehl, Stanley M. Stevens Jr., and Brant R. Burkhardt

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Incremental Validity of Useful Field of View Subtests for the Prediction of Instrumental Activities of Daily Living, Frederik Aust and Jerri D. Edwards

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The Exceptionally High Reactivity of Cys 621 is Critical for Electrophilic Activation of the Sensory Nerve Ion Channel TRPA1, Parmvir K. Bahia, Thomas A. Parks, Katherine R. Stanford, David A. Mitchell, Sameer Varma, Stanley M. Stevens Jr., and Thomas E. Taylor-Clark

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Towards an Understanding of the Propensity for Crystalline Hydrate Formation by Molecular Compounds, Alankriti Bajpai, Hayley S Scott, Tony Pham, Kai-Jie Chen, Brian Space, Matteo Lusi, Miranda L Perry, and Michael J Zaworotko

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Staphylococcus aureus Coordinates Leukocidin Expression and Pathogenesis by Sensing Metabolic Fluxes via RpiRc, Divya Balasubramanian, Elizabeth A Ohneck, Jessica Chapman, Andy Weiss, Min Kyung Kim, Tamara Reyes-Robles, Judy Zhong, Lindsey N. Shaw, Desmond S. Lun, Beatrix Ueberheide, Bo Shopsin, and Victor J Torres

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Coping Strategies Modify Risk of Depression Associated with Hematopoietic Cell Transplant Symptomatology, Anna Barata, Brian D. Gonzalez, Steven K. Sutton, Brent J. Small, Paul B. Jacobsen, Teresa Field, Hugo Fernandez, and Heather S. L. Jim

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Guest Editorial: Flipped Classrooms in Stem, Lorena A. Barba, Autar Kaw, and Joseph M. LeDoux

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Environmental Responses of the Northeast Antarctic Peninsula to the Holocene Climate Variability, Loïc Barbara, Xavier Crosta, Amy Leventer, Sabine Schmidt, Johan Etourneau, Eugene Domack, and Guillaume Massé

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Behavioral and Psychological Aspects of Exercise Across Stages of Eating Disorder Recovery, Anna M. Bardone-Cone, M. K. Higgins, Sara M. St George, Ilyssa Rosenzweig, Lauren M. Schaefer, Ellen E. Fitzsimmons-Craft, Taylor M. Henning, and Brittany F. Preston

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Towable Instrumentation for Use with a Hand-Deployed Remotely Operated Vehicle, Laughlin D. L. Barker, Stacy L. Kim, Benjamin T. Saenz, D. J. Osborne, and Kendra L. Daly

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Dependence of Satellite Ocean Color Data Products on Viewing Angles: A Comparison Between SeaWiFS, MODIS, and VIIRS, Brian B. Barnes and Chuanmin Hu

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Island building in the South China Sea: detection of turbidity plumes and artificial islands using Landsat and MODIS data, Brian B. Barnes and Chuanmin Hu

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ETAA1 Acts at Stalled Replication Forks to Maintain Genome Integrity, Thomas E. Bass, Jessica W. Luzwick, Gina Kavanaugh, Clinton Carroll, Huzefa Dungrawala, Gloria G. Glick, Michael D. Feldkamp, Reid Putney, Walter J. Chazin, and David Cortez

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Mechanistic Binding Insights for 1-deoxy-D-Xylulose-5-PhosphateSynthase, the Enzyme Catalyzing the First Reaction of Isoprenoid Biosynthesis in the Malaria-causing Protists, Plasmodium falciparum and Plasmodium vivax, Matthew R. Battistini, Christopher Shoji, Sumit Handa, Leonid Breydo, and David J. Merkler

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Effect of Promoter Polymorphisms on Cytokine Concentration in Preterm Breast Milk and Subsequent Infant Outcomes, Kelley L. Baumgartel, Maureen Groer, Susan M. Cohen, Dianxu Ren, Diane L. Spatz, and Yvette P. Conley

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Mapping Seagrass and Colonized Hard Bottom in Springs Coast, Florida using WorldView-2 Satellite Imagery, René Dieter Baumstark, Renee Duffey, and Ruiliang Pu

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Transdiagnostic Psychiatric Symptoms and Event-Related Potentials following Rewarding and Aversive Outcomes, Jeffrey S. Bedwell, Geoffrey Potts, Diane C. Gooding, Benjamin J. Trachik, Chi C. Chan, and Christopher C. Spencer

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VHF Radiation Observed During Eruptions of Sakurajima Volcano, Japan, Part I: Overview and Characteristics of Continuous RF, Sonja A. Behnke, Harald E. Edens, Ronald J. Thomas, Stephen R. McNutt, Cassandra M. Smith, Alexa R. Van Eaton, Corrado Cimarelli, and Valeria Cigala

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HIV Stigma in Prisons and Jails: Results from a Staff Survey, Steven Belenko, Richard Dembo, Michael Copenhaver, Matthew Hiller, Holly Swan, Carmen A. Garcia, Daniel O'Connell, Carrie Oser, Frank Pearson, and Jennifer Pankow

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Dancing with Knives: American Cold War Ideology in the Dances of West Side Story, Daniel Belgrad and Ying Zhu

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Using Spaced Retrieval With External Aids to Improve Use of Compensatory Strategies During Eating for Persons With Dementia, Jeanette E. Benigas and Michelle Bourgeois

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Using Video Feedback to Improve Martial Arts Performance, Angela BenitezSantiago and Raymond G. Miltenberger

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Latest Datasets and Technologies Presented in the Workshop on Grasping and Manipulation Datasets, Matteo Bianchi, Jeannette Bohg, and Yu Sun

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TephraProb: A Matlab Package for Probabilistic Hazard Assessments of Tephra Fallout, Sébastien Biass, Costanza Bonadonna, Laura J. Connor, and Charles B. Connor

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The Infinity(x)-equation in Grushin-type Spaces, Thomas Bieske

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Toponymic Complexities in Sub-Saharan African Cities: Informative and Symbolic Aspects from Past to Present, Liora Bigon and Ambe J. Njoh

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Conflict over Transitional Justice in Nepal, Krista Billingsley

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Identification of Novel Cyclic Lipopeptides from a Positional Scanning Combinatorial Library with Enhanced Antibacterial and Antibiofilm Activities, Nina Bionda, Renee M. Fleeman, César de la Fuente-Núñez, Maria C. Rodriguez, Fany Reffuveille, Lindsey N. Shaw, Irena Pastar, Stephen C Davis, Robert E W Hancock, and Predrag Cudic

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Trimethylamine Oxide Accumulation as a Function of Depth in Hawaiian Mid-water Fishes, Abigail B. Bockus and Brad A. Seibel

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E-books for the Classroom & Open Access Textbooks: Two ways to help students save money on textbooks, Jason Boczar and Laura Pascual

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Effects of Parturition on Pelvic Age Indicators, Rosanne Bongiovanni

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The Ferrojan Horse Hypothesis: Iron-Virus Interactions in the Ocean, Chelsea Bonnain, Mya Breitbart, and Kristen N. Buck

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Peptidoglycan Recycling in Gram-positive Bacteria Is Crucial for Survival in Stationary Phase, Marina Borisova, Rosmarie Gaupp, Amanda Duckworth, Alexander Schneider, Désirée Dalügge, Maraike Mühleck, Denise Deubel, Sandra Unsleber, Wenqi Yu, Günther Muth, Markus Bischoff, Friedrich Götz, and Christoph Mayer

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De Russische Revolutie, Kees Boterbloem

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Edward Cohn, The High Title of a Communist: Postwar Party Discipline and the Values of the Soviet Regime, Kees Boterbloem

The Maisky Diaries: Red Ambassador to the Court of St. James’s, 1932-1943, edited by Gabriel Gorodetsky, Kees Boterbloem

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Review of Nationalizing Empires, edited by Stefan Berger and Alexei Miller, Kees Boterbloem

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Cortázar-Fuentes. Entrecruzamientos. Fuentes-Cortázar., Pablo Brescia

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Pain, Affect, and Rumination: An Experimental Test of the Emotional Cascade Theory in Two Undergraduate Samples, Konrad Bresin and Edelyn Verona

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The Shapes of Bird Beaks are Highly Controlled by Nondietary Factors, Jen A. Bright, Jesús Marugán-Lobón, Samuel N. Cobb, and Emily J. Rayfield

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Transcriptomic Analysis of Staphylococcal SRNAs: Insights into Species-specific Adaption and the Evolution of Pathogenesis, William H. Broach, Andy Weiss, and Lindsey N. Shaw

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Improving Compensatory Mitigation in the Tampa Bay Watershed, Aaron T. R. Brown and Thomas Crisman

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Anogenital Human Papillomavirus Infection and HIV Infection Outcomes Among Peruvian Transgender Women: Results from a Cohort Study, Brandon Brown, Jerome T. Galea, Gita Byraiah, Tonia Poteat, Segundo R. Leon, Gino Calvo, Hugo Sánchez, Thomas J. Coates, and Jeffrey D. Klausner

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Transparency of Participant Incentives in Hiv Research, Brandon Brown, Jerome T. Galea, Peter Davidson, and Kaveh Khoshnood

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Psychological Reactance and HIV-related Stigma Among Women Living with HIV, Monique J. Brown, Julie M. Serovich, Judy A. Kimberly, and Jinxiang Hu

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Depressive Symptoms, Substance Use and Partner Violence Victimization Associated with HIV Disclosure Among Men Who have Sex with Men, Monique Brown, Julie M. Serovich, and Judy A. Kimberly

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An Experiment in Graduate Education: A Marine Science Adventure across the Indian Ocean, Vicki Buchsbaum Pearse, John C. Ogden, and Sharon J. Proctor

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Improving Rural Geriatric Care Through Education: A Scalable, Collaborative Project, Harleah G. Buck, Ann Kolanowski, Donna Fick, and Lawrence Baronner

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Effects of Nutrient Supplementation on Host-pathogen Dynamics of the Amphibian Chytrid Fungus: A Community Approach, Julia C. Buck, Jason R. Rohr, and Andrew R. Blaustein

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Biogeochemical Cycling of Organic Iron-binding Ligands: Insights From GEOTRACES Data in the Atlantic Ocean, Kristen N. Buck, Chelsea Bonnain, and Randelle Bundy

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An Intercomparison of Dissolved Iron Speciation at the Bermuda Atlantic Time-series Study (BATS) Site: Results from GEOTRACES Crossover Station A, Kristen N. Buck, Loes J. A. Gerringa, and Micha J. A. Rijkenberg

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Intense Piano Training on Self-efficacy and Physiological Stress in Aging, Jennifer A. Bugos, Simran Kochar, and Nathan Maxfield

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Darwin's Warm Little Pond: A One‐Pot Reaction for Prebiotic Phosphorylation and the Mobilization of Phosphate from Minerals in a Urea‐Based Solvent, Bradley Burcar, Matthew Pasek, Maheen Gull, Brian J. Cafferty, Francisco Velasco, Nicholas V. Hud, and César Menor-Salvan

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Intrinsic Disorder in Transmembrane Proteins: Roles in Signaling and Topology Prediction, Jérôme Bürgi, Bin Xue, Vladimir N Uversky, and F Gisou van der Goot

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Recurring Patterns Among Scrambled Genes in the Encrypted Genome of the ciliate Oxytricha trifallax, Jonathan Burns, Denys Kukushkin, Xiao Chen, Laura F Landweber, Masahico Saito, and Nataša Jonoska

Framing Conceptual, Procedural, and Emotional Support for Supervisors, Rebecca W. Burns and B. Badiali

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Unearthing the Complexities of Clinical Pedagogy in Supervision: Identifying the Pedagogical Skills of Supervisors, Rebecca W. Burns and Bernard Badiali

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The Boundary Spanner in Professional Development Schools: In Search of Common Nomenclature, Rebecca W. Burns and Wendy Baker

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Making Muffins: Identifying Core Ingredients of School-University Partnerships, Rebecca W. Burns, Jennifer Jacobs, Wendy Baker, and Denise Donahue

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Preservice Teacher Supervision within Field Experiences in a Decade of Reform: A Comprehensive Meta-Analysis of the Empirical Literature from 2001-2013, Rebecca W. Burns, Jennifer Jacobs, and Diane Yendol-Hoppey