Authors

Esther S. Brielle, Harvard University
Jeffrey Fleisher, Rice University
Stephanie Wynne-Jones, University of York
Kendra Sirak, Harvard University
Nasreen Broomandkhoshbacht, Harvard University
Kim Callan, Harvard University
Elizabeth Curtis, Harvard University
Lora Iliev, Harvard University
Ann Marie Lawson, Harvard University
Jonas Oppenheimer, Harvard University
Lijun Qiu, Department of Genetics, Harvard Medical School, Boston, USA
Kristin Stewardson, Harvard University
J. Noah Workman, Harvard University
Fatma Zalzala, Harvard University
George Ayodo, Jaramogi Oginga Odinga University of Science and Technology
Agness O. Gidna, National Museums of Tanzania, Dar es Salaam, Tanzania
Angela Kabiru, Department of Archaeology, National Museums of Kenya, Nairobi, Kenya
Amandus Kwekason, National Museums of Tanzania, Dar es Salaam, Tanzania
Audax Z. Mabulla, University of Dar es Salaam
Fredrick K. Manthi, Department of Earth Sciences, National Museums of Kenya, Nairobi, Kenya
Emmanuel Ndiema, Department of Earth Sciences, National Museums of Kenya, Nairobi, Kenya
Christine Ogola, Department of Earth Sciences, National Museums of Kenya, Nairobi, Kenya
Elizabeth Sawchuk, Cleveland Museum of Natural History, Cleveland, USA
Lihadh Al-Gazali, United Arab Emirates University
Bassam R. Ali, United Arab Emirates University
Salma Ben-Salem, United Arab Emirates University
Thierry Letellier, Laboratoire Evolution et Santé Orale, Faculté de Chirurgie Dentaire, Université Toulouse III—Paul Sabatier, Toulouse, France
Denis Pierron, Laboratoire Evolution et Santé Orale, Faculté de Chirurgie Dentaire, Université Toulouse III—Paul Sabatier, Toulouse, France
Chantal Radimilahy, Institut de Civilisations/Musée d’Art et d’Archéologie, Université d’Antananarivo, Antananarivo, Madagascar
Jean-Aimé Rakotoarisoa, Institut de Civilisations/Musée d’Art et d’Archéologie, Université d’Antananarivo, Antananarivo, Madagascar
Ryan L. Raaum, The City University of New York
Brendan J. Culleton, Institutes of Energy and the Environment
Swapan Mallick, Department of Genetics, Harvard Medical School, Boston, USA
Nadin Rohland, Department of Genetics, Harvard Medical School, Boston, USA
Nick Patterson, Harvard University
Mohammed Ali Mwenje, National Museums of Kenya, Lamu Museums, Lamu, Kenya
Khalfan Bini Ahmed, Coastal Archaeology, Gede National Monument, Gede, Kenya
Mohamed Mchulla Mohamed, Coastal Archaeology, Fort Jesus Museum, Mombasa, Kenya
Sloan R. Williams, University of Illinois at Chicago
Janet Monge, University of Pennsylvania Museum of Archaeology and Anthropology
Sibel Kusimba, University of South FloridaFollow
Mary E. Prendergast, Rice University
David Reich, Harvard University
Chapurukha M. Kusimba, University of South FloridaFollow

Document Type

Article

Publication Date

2023

Keywords

Archaeology, Evolutionary genetics, Genetic variation

Digital Object Identifier (DOI)

https://doi.org/10.1038/s41586-023-05754-w

Abstract

The urban peoples of the Swahili coast traded across eastern Africa and the Indian Ocean and were among the first practitioners of Islam among sub-Saharan people1,2. The extent to which these early interactions between Africans and non-Africans were accompanied by genetic exchange remains unknown. Here we report ancient DNA data for 80 individuals from 6 medieval and early modern (ad 1250–1800) coastal towns and an inland town after ad 1650. More than half of the DNA of many of the individuals from coastal towns originates from primarily female ancestors from Africa, with a large proportion—and occasionally more than half—of the DNA coming from Asian ancestors. The Asian ancestry includes components associated with Persia and India, with 80–90% of the Asian DNA originating from Persian men. Peoples of African and Asian origins began to mix by about ad 1000, coinciding with the large-scale adoption of Islam. Before about ad 1500, the Southwest Asian ancestry was mainly Persian-related, consistent with the narrative of the Kilwa Chronicle, the oldest history told by people of the Swahili coast3. After this time, the sources of DNA became increasingly Arabian, consistent with evidence of growing interactions with southern Arabia4. Subsequent interactions with Asian and African people further changed the ancestry of present-day people of the Swahili coast in relation to the medieval individuals whose DNA we sequenced. Analysis of ancient human DNA from the Swahili coast reveals that predominantly African female ancestors and Asian male ancestors formed families after around ad 1000 and lived in elite communities in coastal stone towns.

Rights Information

Creative Commons License
This work is licensed under a Creative Commons Attribution 4.0 License.

Was this content written or created while at USF?

Yes

Citation / Publisher Attribution

Nature, v. 615, p. 866-873

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