Why Should Early-career Scientists Publish in Society Journals, Stephen K. Dolan, Lori D. Banks, Wenqi Yu
Molecular Biosciences Faculty Publications

The Inaugural mBio Junior Editorial Board—lessons Learned and the Path Forward Toward Improving the Peer Review Process, Cynthia Ayefoumi Adinortey, Stephen K. Dolan, Sarah Doore, Rebeccah Lijek, Diana Priscila Pires, Wenqi Yu, Elizabeth B. Draganova, Lennart Schada von Borzyskowski
Molecular Biosciences Faculty Publications

Tracking Cell Wall-anchored Proteins in Gram-positive Bacteria, Salvatore J. Scaffidi, Wenqi Yu
Molecular Biosciences Faculty Publications

Exploring strain variation and bacteriophage predation in the gut microbiome of Ciona robusta, Celine Grace F. Atkinson
USF Tampa Graduate Theses and Dissertations

The Identification of Two M20B Family Peptidases Required for Full Virulence in Staphylococcus Aureus, Nathanial James Torres, Devon Rizzo, Maria A. Reinberg, Mary-Elizabeth Jobson, Brendan C. Totzke, Jessica K. Jackson, Wenqi Yu, Lindsey Neil Shaw
Molecular Biosciences Faculty Publications

OTUD5 Limits Replication Fork Instability by Organizing Chromatin Remodelers, Angelo de Vivo, Hongseon Song, Yujin Lee, Neysha Tirado-Class, Anthony Sanchez, Sandy D. Westerheide, Huzefa Dungrawala, Younghoon Kee
Molecular Biosciences Faculty Publications

DCAF14 Regulates CDT2 to Promote Set8-dependent Replication Fork Protection, Neysha Tirado-Class, Caitlin Hathaway, Anthony Nelligan, Huzefa Dungrawala
Molecular Biosciences Faculty Publications

Regulation of the Heat Shock Response via Lysine Acetyltransferase CBP-1 and in Neurodegenerative Disease in Caenorhabditis elegans, Lindsey N. Barrett
USF Tampa Graduate Theses and Dissertations

The Role Of Eicosanoid Metabolism in Mammalian Wound Healing and Inflammation, Kenneth D. Maus
USF Tampa Graduate Theses and Dissertations

PHIP Variants Associated with Chung–jansen Syndrome Disrupt Replication Fork Stability and Genome Integrity, Neysha Tirado-Class, Caitlin Hathaway, Wendy K. Chung, Huzefa Dungrawala
Molecular Biosciences Faculty Publications

Characterizing the Impact of Postharvest Temperature Stress on Polyphenol Profiles of Red and White-Fruited Strawberry Cultivars, Alyssa N. Smith
USF Tampa Graduate Theses and Dissertations

Determining the Role of Dendritic Cells During Response to Treatment with Paclitaxel/Anti-TIM-3, Alycia Gardner
USF Tampa Graduate Theses and Dissertations

The Role Of Cpeb2 Alternative Splicing In TNBC Metastasis, Shaun C. Stevens
USF Tampa Graduate Theses and Dissertations

The Multifaceted Role of CCAR-1 in the Alternative Splicing and Germline Regulation in Caenorhabditis elegans, Doreen Ikhuva Lugano
USF Tampa Graduate Theses and Dissertations

Investigation of an Alternative Protocol for the Production of SARS-CoV-2 Antigenic Proteins, Nichole Ninaltowski
USF Tampa Graduate Theses and Dissertations

CircREV1 Expression in Triple-Negative Breast Cancer, Meagan P. Horton
USF Tampa Graduate Theses and Dissertations

Cytoplasmic Polyadenylation Element Binding Protein 2 Alternative Splicing Regulates HIF1α During Chronic Hypoxia, Emily M. Mayo
USF Tampa Graduate Theses and Dissertations

Bone Microenvironmental Control of Skeletal Malignancy, Chen Hao Lo
USF Tampa Graduate Theses and Dissertations

Tracking the Subcellular Localization of Surface Proteins in Staphylococcus aureus by Immunofluorescence Microscopy, Salvatore J. Scaffidi, Mac A. Shebes, Wenqi Yu
Molecular Biosciences Faculty Publications

Spatial Regulation of Protein A in Staphylococcus aureus, Ran Zhang, Mac A. Shebes, Kelvin Kho, Salvatore J. Scaffidi, Timothy C. Meredith, Wenqi Yu
Molecular Biosciences Faculty Publications

DCAF14 Promotes Stalled Fork Stability to Maintain Genome Integrity, Arik Townsend, Gabriella Lora, Justin Engel, Neysha Tirado-Class, Huzefa Dungrawala
Molecular Biosciences Faculty Publications

New Mechanisms that Control FACT Histone Chaperone and Transcription-mediated Genome Stability, Angelo Vincenzo de Vivo Diaz
USF Tampa Graduate Theses and Dissertations

Role of ceramide-1 phosphate in regulation of sphingolipid and eicosanoid metabolism in lung epithelial cells, Brittany A. Dudley
USF Tampa Graduate Theses and Dissertations

Regulation of the Heat Shock Response and HSF-1 Nuclear Stress Bodies in C. elegans, Andrew Deonarine
USF Tampa Graduate Theses and Dissertations

Surface Runoff Alters Cave Microbial Community Structure and Function, Madison Davis, Maria A. Messina, Giuseppe Nicolosi, Salvatore Petralia, Melvin D. Baker, Christiana K. S. Mayne, Chelsea M. Dinon, Christina J. Moss, Bogdan P. Onac, James R. Garey
Bogdan Onac

The Impact of Myeloid-Mediated Co-Stimulation and Immunosuppression on the Anti-Tumor Efficacy of Adoptive T cell Therapy, Pasquale Patrick Innamarato
USF Tampa Graduate Theses and Dissertations

Biological and Proteomic Characterization of Cornus officinalis on Human 1.1B4 Pancreatic β Cells: Exploring Use for T1D Interventional Application, Arielle E. Tawfik
USF Tampa Graduate Theses and Dissertations

Mechanistic and Translational Studies on Skeletal Malignancies, Jeremy McGuire
USF Tampa Graduate Theses and Dissertations

Surface Runoff Alters Cave Microbial Community Structure and Function, Madison Davis, Maria A. Messina, Giuseppe Nicolosi, Salvatore Petralia, Melvin D. Baker, Christiana K. S. Mayne, Chelsea M. Dinon, Christina J. Moss, Bogdan P. Onac, James R. Garey
Molecular Biosciences Faculty Publications

The Role of aPKCs and aPKC Inhibitors in Cell Proliferation and Invasion in Breast and Ovarian Cancer, Tracess B. Smalley
USF Tampa Graduate Theses and Dissertations

To Mid-cell and Beyond: Characterizing the Roles of GpsB and YpsA in Cell Division Regulation in Gram-positive Bacteria, Robert S. Brzozowski
USF Tampa Graduate Theses and Dissertations

Cornus Officinalis Promotes IGFBP2 and Autophagy in Human 1.1B4 Pancreatic Cell Line as Revealed by Employing a Global Proteomic Approach via Mass Spectrometry, Arielle Elizabeth Tawfik, Jennifer Guergues, Stanley M. Stevens Jr, Brant Roger Burkhardt
Molecular Biosciences Faculty Publications

miR146a-mediated Targeting of FANCM during Inflammation Compromises Genome Integrity, Devakumar Sundaravinayagam, Hye Rim Kim, TingTing Wu, Hyun Hee Kim, Semo Jun, Jeong-Heon Cha, Younghoon Kee, Ho Jin You, Jung-Hee Lee
Molecular Biosciences Faculty Publications

Draft Genome Sequence of Verrucosispora sp. Strain CWR15, Isolated from a Gulf of Mexico Sponge, Sarah J. Kennedy, Eleonora Cella, Mohammad Jubair, Taj Azarian, Bill J. Baker, Lindsey N. Shaw
Molecular Biosciences Faculty Publications

The Mevalonate Auxotrophic Mutant of Staphylococcus aureus Can Adapt to Mevalonate Depletion, Wenqi Yu, Martina Leibig, Tina Schäfer, Ralph Bertram, Knut Ohlsen, Friedrich Götz
Molecular Biosciences Faculty Publications

Improved Description of Ligand Polarization Enhances Transferability of Ion–ligand Interactions, Vered Wineman-Fisher, Yasmine Al-Hamdani, Péter R. Nagy, Alexandre Tkatchenko, Sameer Varma
Molecular Biosciences Faculty Publications

Improved Description of Ligand Polarization Enhances Transferability of Ion–ligand Interactions, Vered Wineman-Fisher, Yasmine Al-Hamdani, Péter R. Nagy, Alexandre Tkatchenko, Sameer Varma
Molecular Biosciences Faculty Publications

Transferable Interactions of Li⁺ and Mg²⁺ Ions in Polarizable Models, Vered Wineman-Fisher, Julián Meléndez Delgado, Péter R. Nagy, Eric Jakobsson, Sagar A. Pandit, Sameer Varma
Molecular Biosciences Faculty Publications

The Role of Atypical Protein Kinase C in Colorectal Cancer Cells Carcinogenesis, S M Anisul Islam
USF Tampa Graduate Theses and Dissertations

Lung Cancer Cells Survive EGFR TKI Exposure Through Upregulation of Cholesterol Synthesis, Mark Howell
USF Tampa Graduate Theses and Dissertations

Targeting PTEN for Therapy in Cancer and PTENopathies, Emily Palumbo
USF Tampa Graduate Theses and Dissertations

Characterization of the Autophagic-Iron Axis in the Pathophysiology of Endometriosis and Epithelial Ovarian Cancers, Stephanie Rockfield
USF Tampa Graduate Theses and Dissertations

Functional Characterization of the Ovarian Tumor Domain Deubiquitinating Enzyme 6B, Jasmin M. D'Andrea
USF Tampa Graduate Theses and Dissertations

Novel Insights into the Multifaceted Roles of BLM in the Maintenance of Genome Stability, Vivek M. Shastri
USF Tampa Graduate Theses and Dissertations

Enhancing Immunotherapeutic Interventions for Treatment of Chronic Lymphocytic Leukemia, Kamira K. Maharaj
USF Tampa Graduate Theses and Dissertations

Integrated Molecular Characterization of Lung Adenocarcinoma with Implications for Immunotherapy, Nicholas T. Gimbrone
USF Tampa Graduate Theses and Dissertations

Biochemical and Proteomic Approaches to Determine the Impact Level of Each Step of the Supply Chain on Tomato Fruit Quality, Robert T. Madden
USF Tampa Graduate Theses and Dissertations

Conserved glycine residues control transient helicity and disorder in the cold regulated protein, Cor15a, Oluwakemi Sowemimo
USF Tampa Graduate Theses and Dissertations

Ion-Hydroxyl Interactions: From High-Level Quantum Benchmarks to Transferable Polarizable Force Fields, Vered Wineman-Fisher, Yasmine Al-Hamdani, Iqbal Addou, Alexandre Tkatchenko, Sameer Varma
Molecular Biosciences Faculty Publications

Assembling Pentatopic Terpyridine Ligands with Three Types of Coordination Moieties into a Giant Supramolecular Hexagonal Prism: Synthesis, Self-Assembly, Characterization, and Antimicrobial Study, Heng Wang, Chung-Hao Liu, Kun Wang, Minghui Wang, Hao Yu, Sneha Kandapal, Robert Brzozowski, Bingqian Xu, Ming Wang, Shuai Lu, Xin-Qi Hao, Prahathees J. Eswara, Mu-Ping Nieh, Jianfeng Cai, Xiaopeng Li
Molecular Biosciences Faculty Publications

Improved Methodology for Sensitive and Rapid Quantitative Proteomic Analysis of Adult-Derived Mouse Microglia: Application to a Novel In Vitro Mouse Microglial Cell Model, Jennifer Guergues, Ping Zhang, Bin Liu, Stanley M. Stevens Jr.
Molecular Biosciences Faculty Publications

Functional Analysis of the Replication Fork Proteome Identifies BET Proteins as PCNA Regulators, Sarah R. Wessel, Kareem N. Mohni, Jessica W. Luzwick, Huzefa Dungrawala, David Cortez
Molecular Biosciences Faculty Publications

A Rapid and Adaptable Lipidomics Method for Quantitative UPLC-mass Spectrometric Analysis of Phosphatidylethanolamine and Phosphatidylcholine in Vitro, and in Cells, Daniel J. Stephenson, H. Patrick MacKnight, L. Alexis Hoeferlin, Margaret A. Park, Jeremy C. Allegood, Christopher L. Cardona, Charles E. Chalfant
Molecular Biosciences Faculty Publications

Characterization of Porphyromonas gingivalis Sialidase and Disruption of its Role in Host–pathogen Interactions, Andrew M. Frey, Marianne J. Satur, Chatchawal Phansopa, Kiyonobu Honma, Paulina A. Urbanowicz, Daniel I. R. Spencer, Jonathan Pratten, David Bradshaw, Ashu Sharma, Graham Stafford
Molecular Biosciences Faculty Publications

Structural basis of phosphatidylcholine recognition by the C2–domain of cytosolic phospholipase A,₂α, Yoshinori Hirano, Yong-Guang Gao, Daniel J. Stephenson, Ngoc T. Vu, Lucy Malinina, Dhirendra K. Simanshu, Charles E. Chalfant, Dinshaw J. Patel, Rhoderick E. Brown
Molecular Biosciences Faculty Publications

Cornus Officinalis Significantly Improves Oxidative Capacity and Promotes the Calcium-Dependent Transcription Factor, NFATC2, in Human 1.1B4 Pancreatic Cell Line, Arielle Sharp, Alexis Coiner, Brant Burkhardt
Molecular Biosciences Faculty Publications

The OTUD5–UBR5 Complex Regulates FACT-mediated Transcription at Damaged Chromatin, Angelo de Vivo, University of South Florida, Jose Yegres, Jeonghyeon Kim, Sylvia Emly, Younghoon Kee
Molecular Biosciences Faculty Publications

Functional Inhibition of Acid Sphingomyelinase Disrupts Infection by Intracellular Bacterial Pathogens, Chelsea L. Cockburn, Ryan S. Green, Sheela R. Damle, Rebecca K. Martin, Naomi N. Ghahrai, Punsiri M. Colonne, Marissa S. Fullerton, Daniel H. Conrad, Charles E. Chalfant, Daniel E. Voth, Elizabeth A. Rucks, Stacey D. Gilk, Jason A. Carlyon
Molecular Biosciences Faculty Publications

Investigation of Anemarrhena asphodeloides and its Constituent Timosaponin-AIII as Novel, Naturally Derived Adjunctive Therapeutics for the Treatment of Advanced Pancreatic Cancer, Catherine B. MarElia
USF Tampa Graduate Theses and Dissertations

Investigating the Roles of Fucosylation and Calcium Signaling in Melanoma Invasion, Tyler S. Keeley
USF Tampa Graduate Theses and Dissertations

Actinomycin D and Telmisartan Combination Therapy Targets Lung Cancer Stem Cells, Ryan Green
USF Tampa Graduate Theses and Dissertations

Fatty Acid Amides and Their Biosynthetic Enzymes Found in Insect Model Systems, Ryan L. Anderson
USF Tampa Graduate Theses and Dissertations

In Vivo Metabolic Tracing Demonstrates the Site‐Specific Contribution of Hepatic Ethanol Metabolism to Histone Acetylation, Crystina L. Kriss, Emily Gregory-Lott, Aaron J. Storey, Alan J. Tackett, Wayne P. Wahls, Stanley M. Stevens Jr.
Molecular Biosciences Faculty Publications

Uncoupling the Folding and Binding of an Intrinsically Disordered Protein, Anusha Poosapati, Emily Gregory, Wade M. Borcherds, Lucia B. Chemes, Gary Daughdrill
Molecular Biosciences Faculty Publications

Anemarrhena asphodeloides Bunge and its Constituent Timosaponin‐AIII induce Cell Cycle Arrest and Apoptosis in Pancreatic Cancer Cells, Catherine B. MarElia, Arielle Sharp, Tiffany A. Shemwell, Y. C. Zhang, Brant R. Burkhardt
Molecular Biosciences Faculty Publications

Identification of a unique transcriptional architecture for the sigS operon in Staphylococcus aureus, Halie Kay Miller, Whittney Burda, Ronan K. Carroll, Lindsey N. Shaw
Molecular Biosciences Faculty Publications

Identification of a Novel Polyamine Scaffold With Potent Efflux Pump Inhibition Activity Toward Multi-Drug Resistant Bacterial Pathogens, Renee Fleeman, Ginamarie Debevec, Kirsten Antonen, Jessie Adams, Radleigh G. Santos, Gregory S. Welmaker, Richard A. Houghten, Marc A. Guilianotti, Lindsey N. Shaw
Molecular Biosciences Faculty Publications

GEsture: An Online Hand-Drawing Tool for Gene Expression Pattern Search, Chunyan Wang, Yiqing Xu, Xuelin Wang, Li Zhang, Suyun Wei, Qiaolin Ye, Youxiang Zhu, Hengfu Yin, Manoj Nainwal, Luis Tanon-Reyes, Feng Cheng, Tongming Yin, Ning Ye
Molecular Biosciences Faculty Publications

Machine Learning Approaches to Evaluate Correlation Patterns in Allosteric Signaling: A Case Study of the PDZ2 Domain, Mohsen Botlani-Esfahani, Anhaf Siddiqui, Sameer Varma
Molecular Biosciences Faculty Publications

The Role of Phosphohistidine Phosphatase 1 in Ethanol-induced Liver Injury, Daniel Richard Martin
USF Tampa Graduate Theses and Dissertations

Investigation of Alcohol-Induced Changes in Hepatic Histone Modifications Using Mass Spectrometry Based Proteomics, Crystina Leah Kriss
USF Tampa Graduate Theses and Dissertations

Circulating PANDER Concentration is Associated with Increased HbA1c and Fasting Blood Glucose in Type 2 Diabetic Subjects, Catherine B. MarElia, Melanie N. Kuehl, Tiffany A. Shemwell, Amy C. Alman, Brant R. Burkhardt
Molecular Biosciences Faculty Publications

Identification of Regulatory miRNAs Associated with Ethanol-Induced Microglial Activation Using Integrated Proteomic and Transcriptomic Approaches, Brandi Jo Cook
USF Tampa Graduate Theses and Dissertations

Molecular Basis for the Hierarchical Dependency of Collagen Mechanics, Sameer Varma, Joseph P R O Orgel, Jay D Schieber
Molecular Biosciences Faculty Publications

Sgs1 Binding to Rad51 Stimulates Homology-Directed DNA Repair in Saccharomyces cerevisiae, Lillian Campos-Doerfler, Salahuddin Syed, Kristina H Schmidt
Molecular Biosciences Faculty Publications

moDCs, Less Problems, Alycia Gardner, Brian Ruffell
Molecular Biosciences Faculty Publications

Evidence for Inhibition of Topoisomerase 1A by Gold(III) Macrocycles and Chelates Targeting Mycobacterium tuberculosis and Mycobacterium abscessus, Rashmi Gupta, Carolina Rodrigues Felix, Matthew P. Akerman, Kate J. Akerman, Cathryn A. Slabber, Wenjie Wang, Jessie Adams, Lindsey N. Shaw
Molecular Biosciences Faculty Publications

Expression and Function of Nuclear Receptor Coactivator 4 Isoforms in Transformed Endometriotic and Malignant Ovarian Cells, Stephanie Rockfield, Idhaliz Flores, Meera Nanjundan
Molecular Biosciences Faculty Publications

Septal Secretion of Protein A in Staphylococcus aureus Requires Seca and Lipoteichoic Acid Synthesis, Wenqi Yu, Dominique Missiakas, Olaf Schneewind
Molecular Biosciences Faculty Publications

RADX Modulates RAD51 Activity to Control Replication Fork Protection, Kamakoti P. Bhat, Archana Krishnamoorthy, Huzefa Dungrawala, Edwige B. Garcin, Mauro Modesti, David Cortez
Molecular Biosciences Faculty Publications

Yeast Lifespan Variation Correlates with Cell Growth and Sir2 Expression, Jessica T. Smith, Jill W. White, Huzefa Dungrawala, Hui Hua, Brandt L. Schneider
Molecular Biosciences Faculty Publications

Mbd2-CP2c loop drives adult-type globin Gene Expression and Definitive Erythropoiesis, Min Young Kim, Ji Sook Kim, Seung Han Son, Chang Su Lim, Hea Young Eum, Dae Hyun Ha, Mi Ae Park, Eun Jung Baek, Buom-Yong Ryu, Ho Chul Kang, Vladimir N. Uversky, Chul Geun Kim
Molecular Biosciences Faculty Publications

Coffee Extract and Caffeine Enhance the Heat Shock Response and Promote Proteostasis in an HSF-1-dependent Manner in Caenorhabditis elegans, Jessica Brunquell, Stephanie Morris, Alana Snyder, Sandy D. Westerheid
Molecular Biosciences Faculty Publications

How Many Differentially Expressed Genes: A Perspective from the Comparison of Genotypic and Phenotypic Distances, Bi Zhao, Aqeela Erwin, Bin Xue
Molecular Biosciences Faculty Publications

CPTP: A Sphingolipid Transfer Protein that Regulates Autophagy and Inflammasome Activation, Shrawan K. Mishra, Yong-Guang Gao, Yibin Deng, Charles E. Chalfant, Edward H. Hinchcliffe, Rhoderick E. Brown
Molecular Biosciences Faculty Publications

Novel Role of Histone Deacetylase 11 (HDAC11) in Regulating Normal and Malignant Hematopoiesis, Jie Chen
USF Tampa Graduate Theses and Dissertations

The Role of Sgs1 and Exo1 in the Maintenance of Genome Stability., Lillian Campos-Doerfler
USF Tampa Graduate Theses and Dissertations

Role of Heat Shock Transcription Factor 1 in Ovarian Cancer Epithelial-Mesenchymal Transition and Drug Sensitivity, Chase David Powell
USF Tampa Graduate Theses and Dissertations

The Role of Elevated Hyaluronan-Mediated Motility Receptor (RHAMM/HMMR) in Ovarian Cancer, Stephanie T. Buttermore
USF Tampa Graduate Theses and Dissertations

Regulation of Extracellular Signal-Regulated Kinase by Histone Deacetylase 6, Jheng-Yu Wu
USF Tampa Graduate Theses and Dissertations

Functional Roles of Matrix Metalloproteinases in Bone Metastatic Prostate Cancer, Jeremy S. Frieling
USF Tampa Graduate Theses and Dissertations

Uncovering Transcriptional Activators and Targets of HSF-1 in Caenorhabditis elegans, Jessica Brunquell
USF Tampa Graduate Theses and Dissertations

Mass-spectrometry Based Proteomics of Age-related Changes in Murine Microglia, Antwoine Flowers
USF Tampa Graduate Theses and Dissertations

Pathogenic Conversion of Coagulase-negative Staphylococci, Wenqi Yu, Hwan Keun Kim, Sabine Rauch, Olaf Schneewind, Dominique Missiakas
Molecular Biosciences Faculty Publications

Synchronization of Yeast, Jessica Smith, Arkadi Manukyan, Hui Hua, Huzefa Dungrawala, Brandt L. Schneider
Molecular Biosciences Faculty Publications

RADX Promotes Genome Stability and Modulates Chemosensitivity by Regulating RAD51 at Replication Forks, Huzefa Dungrawala, Kamakoti P. Bhat, Rémy Le Meur, Walter J. Chazin, Xia Ding, Shyam K. Sharan, Sarah R. Wessel, Aditya A. Sathe, Runxiang Zhao, David Cortez
Molecular Biosciences Faculty Publications

Bacterial Cell Division: Nonmodels Poised to Take the Spotlight, Prahathees J. Eswara, Kumaran S. Ramamurthi
Molecular Biosciences Faculty Publications

A Family of Genus-specific RNAs in Tandem with DNA-binding Proteins Control Expression of the badA Major Virulence Factor Gene in Bartonella Henselae, Nhan Tu, Ronan K. Carroll, Andy Weiss, Lindsey N. Shaw, Gael Nicolas, Sarah Thomas, Amorce Lima, Udoka Okaro, Burt Anderson
Molecular Biosciences Faculty Publications

Towards the Complete Proteinaceous Regulome of Acinetobacter Baumannii, Leila G. Casella, Andy Weiss, Ernesto Pérez-Rueda, J Antonio Ibarra, Lindsey N. Shaw
Molecular Biosciences Faculty Publications

Mechanisms of IKBKE Activation in Cancer, Sridevi Challa
USF Tampa Graduate Theses and Dissertations

VDR-RIPK1 Interaction and its Implications in Cell Death and Cancer Intervention, Waise Quarni
USF Tampa Graduate Theses and Dissertations

Regulation of nAChRs and Stemness by Nicotine and E-cigarettes in NSCLC, Courtney Schaal
USF Tampa Graduate Theses and Dissertations

CMG Helicase Assembly and Activation: Regulation by c-Myc through Chromatin Decondensation and Novel Therapeutic Avenues for Cancer Treatment, Victoria Bryant
USF Tampa Graduate Theses and Dissertations

Cell Cycle Arrest by TGFß1 is Dependent on the Inhibition of CMG Helicase Assembly and Activation, Brook Samuel Nepon-Sixt
USF Tampa Graduate Theses and Dissertations

Respiratory Syncytial Virus-infected Mesenchymal Stem Cells Regulate Immunity via Interferon-beta and Indoleamine-2,3-dioxygenase, Michael B. Cheung
USF Tampa Graduate Theses and Dissertations

Nonreplicative DNA Helicases Involved in Maintaining Genome Stability, Salahuddin Syed
USF Tampa Graduate Theses and Dissertations

Global Regulator of Virulence A (GrvA) Coordinates Expression of Discrete Pathogenic Mechanisms in Enterohemorrhagic Escherichia coli through Interactions with GadW-GadE, Jason K. Morgan, Ronan K. Carroll, Carly M. Harro, Khoury W Vendura, Lindsey N. Shaw, James T. Riordan
Molecular Biosciences Faculty Publications

Potential Role of PCTAIRE-2, PCTAIRE-3 and P-Histone H4 in Amyloid Precursor Protein-dependent Alzheimer Pathology, Dale Chaput, Lisa Kirouac, Stanley M. Stevens Jr., Jaya Padmanabhan
Molecular Biosciences Faculty Publications

Peptidoglycan Recycling in Gram-positive Bacteria Is Crucial for Survival in Stationary Phase, Marina Borisova, Rosmarie Gaupp, Amanda Duckworth, Alexander Schneider, Désirée Dalügge, Maraike Mühleck, Denise Deubel, Sandra Unsleber, Wenqi Yu, Günther Muth, Markus Bischoff, Friedrich Götz, Christoph Mayer
Molecular Biosciences Faculty Publications

Antibodies against a Secreted Product of Staphylococcus aureus Trigger Phagocytic Killing, Lena Thomer, Carla Emolo, Vilasack Thammavongsa, Hwan Keun Kim, Molly E. McAdow, Wenqi Yu, Matthew Kieffer, Olaf Schneewind, Dominique Missiakas
Molecular Biosciences Faculty Publications

Nanorough Titanium Surfaces Reduce Adhesion of Escherichia coli and Staphylococcus aureus via Nano Adhesion Points, Claudia Lüdecke, Martin Roth, Wenqi Yu, Uwe Horn, Jörg Bossert, Klaus D. Jandt
Molecular Biosciences Faculty Publications

miR146a-Mediated Targeting of FANCM during Inflammation Compromises Genome Integrity, Devakumar Sundaravinayagam, Hye R. Kim, Ting T. Wu, Hyun H. Kim, Hyun-Seo Lee, Semo Jun, Jeong-Heon Cha, Younghoon Kee, Ho J. You, Jung-Hee Lee
Molecular Biosciences Faculty Publications

ETAA1 Acts at Stalled Replication Forks to Maintain Genome Integrity, Thomas E. Bass, Jessica W. Luzwick, Gina Kavanaugh, Clinton Carroll, Huzefa Dungrawala, Gloria G. Glick, Michael D. Feldkamp, Reid Putney, Walter J. Chazin, David Cortez
Molecular Biosciences Faculty Publications

Staphylococcus Aureus SufT: an Essential Iron-sulphur Cluster Assembly Factor in Cells Experiencing a High-demand for Lipoic Acid, Ameya A. Mashruwala, Christina A. Roberts, Shiven Bhatt, Kerrie L. May, Ronan K. Carroll, Lindsey N. Shaw, Jeffrey M. Boyd
Molecular Biosciences Faculty Publications

Towards the Complete Small RNome of Acinetobacter Baumannii, Andy Weiss, William H. Broach, Mackenzie C. Lee, Lindsey N. Shaw
Molecular Biosciences Faculty Publications

Transcriptomic Analysis of Staphylococcal SRNAs: Insights into Species-specific Adaption and the Evolution of Pathogenesis, William H. Broach, Andy Weiss, Lindsey N. Shaw
Molecular Biosciences Faculty Publications

Direct Analysis in Real Time (DART) of an Organothiophosphate at Ultrahigh Resolution by Fourier Transform Ion Cyclotron Resonance Mass Spectrometry and Tandem Mass Spectrometry, Laszlo Prokai, Stanley M. Stevens Jr.
Molecular Biosciences Faculty Publications

MIR494 Reduces Renal Cancer Cell Survival Coinciding with Increased Lipid Droplets and Mitochondrial Changes, Punashi Dutta, Edward Haller, Arielle Sharp, Meera Nanjundan
Molecular Biosciences Faculty Publications

Measurement of Elastic Modulus of Collagen Type I Single Fiber, Pavel Dutov, Olga Antipova, Sameer Varma, Joseph P R O Orgel, Jay D Schieber
Molecular Biosciences Faculty Publications

Identification of Novel Cyclic Lipopeptides from a Positional Scanning Combinatorial Library with Enhanced Antibacterial and Antibiofilm Activities, Nina Bionda, Renee M. Fleeman, César de la Fuente-Núñez, Maria C. Rodriguez, Fany Reffuveille, Lindsey N. Shaw, Irena Pastar, Stephen C Davis, Robert E W Hancock, Predrag Cudic
Molecular Biosciences Faculty Publications

Hepatic Nutrient and Hormonal Regulation of the PANcreatic-DERived Factor (PANDER) Promoter, Whitney Ratliff
USF Tampa Graduate Theses and Dissertations

Characterization and Diurnal Measurement of Oral Inflammation in Association with Glycemic Control, Periodontal Status, & Glucose Stimulation, Melanie N. Kuehl
USF Tampa Graduate Theses and Dissertations

Function of Long Noncoding RNAs in Breast Cancer, Edward J. Richards
USF Tampa Graduate Theses and Dissertations

Aspirin Triggered Resolution Phase Interaction Product D1: A Novel Treatment for Hyperoxic Acute Lung Injury, Ruan Rollin Cox, Jr.
USF Tampa Graduate Theses and Dissertations

Promoting Genome Stability via Multiple DNA Repair Pathways, Scott Cukras
USF Tampa Graduate Theses and Dissertations

Targeting T-bet for Prevention of Graft-Versus-Host Disease and Leukemia Relapse after Allogeneic Hematopoietic Stem Cell Transplantation, Jianing Fu
USF Tampa Graduate Theses and Dissertations

Ikaros Deficiency Leads To An Imbalance in Effector and Regulatory T Cell Homeostasis in Murine Pancreatic Cancer, Nadine D. Nelson
USF Tampa Graduate Theses and Dissertations

The effects of supplemented metabolites on lifespan and stress response pathways in Caenorhabditis elegans, Clare B. Edwards
USF Tampa Graduate Theses and Dissertations

Genomic Aberrations at the 3q and 14q loci: Investigation of Key Players in Ovarian and Renal Cancer Biology, Punashi Dutta
USF Tampa Graduate Theses and Dissertations

High-throughput Screening of Age-related Changes in Caenorhabditis elegans, Neil Copes
USF Tampa Graduate Theses and Dissertations

Regulation and Targeting of the FANCD2 Activation in DNA Repair, Valentina Celeste Caceres
USF Tampa Graduate Theses and Dissertations

The ΝSaα Specific Lipoprotein Like Cluster (lpl) of S. aureus USA300 Contributes to Immune Stimulation and Invasion in Human Cells, Minh Thu Nguyen, Beatrice Kraft, Wenqi Yu, Dogan Doruk Demicrioglu, Tobias Hertlein, Marc Burian, Mathias Schmaler, Klaus Boller, Isabelle Bekeredjian-Ding, Knut Ohlsen, Birgit Schittek, Friedrich Götz
Molecular Biosciences Faculty Publications

Excretion of Cytoplasmic Proteins (ECP) in Staphylococcus Aureus, Patrick Ebner, Marcel Prax, Mulugeta Nega, Iris Koch, Linda Dube, Wenqi Yu, Janina Rinker, Peter Popella, Matthias Flötenmeyer, Friedrich Götz
Molecular Biosciences Faculty Publications

Excretion of Cytosolic Proteins (ECP) in Bacteria, Friedrich Götz, Wenqi Yu, Linda Dube, Marcel Prax, Patrick Ebner
Molecular Biosciences Faculty Publications

The Role of BRCT-Containing Proteins BRCA1 and PAXIP1 in Cancer, Ankita Jhuraney
USF Tampa Graduate Theses and Dissertations

Strategies for Preventing Age and Neurodegenerative Disease-associated Mitochondrial Dysfunction, Vedad Delic
USF Tampa Graduate Theses and Dissertations

The Replication Checkpoint Prevents Two Types of Fork Collapse without Regulating Replisome Stability, Huzefa Dungrawala, Kristie L. Rose, Kamakoti P. Bhat, Kareem N. Mohni, Gloria G. Glick, Frank B. Couch, David Cortez
Molecular Biosciences Faculty Publications

Inhibition of Shp2 Suppresses Mutant EGFR-induced Lung Tumors in Transgenic Mouse Model of Lung Adenocarcinoma, Valentina E. Schneeberger, Yuan Ren, Noreen Luetteke, Qingling Huang, Liwei Chen, Harshani R. Lawrence, Nicholas J. Lawrence, Eric B. Haura, John M. Koomen, Domenico Coppola, Jie Wu
Molecular Biosciences Faculty Publications

Purification of Proteins on Newly Synthesized DNA Using Ipond, Huzefa Dungrawala, David Cortez
Molecular Biosciences Faculty Publications

Role and Regulation of SnoN/SkiL and PLSCR1 Located at 3q26.2 and 3q23, Respectively, in Ovarian Cancer Pathophysiology, Madhav Karthik Kodigepalli
USF Tampa Graduate Theses and Dissertations

Karst Estuaries: A newly described ecosystem governed by aquifer hydrology, Damian M. Menning
USF Tampa Graduate Theses and Dissertations

Bi-directional signaling between melanoma and the microenvironment generates a protective niche that mediates therapeutic escape, Inna Fedorenko
USF Tampa Graduate Theses and Dissertations

Manipulating the Tumor Microenvironment for Therapeutic Benefit, Kate M. Bailey
USF Tampa Graduate Theses and Dissertations

Regulatory Roles of FACIT Collagens XII and XIV in Cornea Stromal and Endothelial Development and Function, Chinda Hemmavanh
USF Tampa Graduate Theses and Dissertations

Exploration of mutations in erythroid 5-aminolevulinate synthase that lead to increased porphyrin synthesis, Erica Jean Fratz
USF Tampa Graduate Theses and Dissertations

Characterization of Iron Response in Gynecological Cell Lines, Kyle A. Bauckman
USF Tampa Graduate Theses and Dissertations

Immature Myeloid Cells Promote Tumor Formation Via Non-Suppressive Mechanism, Myrna Lillian Ortiz
USF Tampa Graduate Theses and Dissertations

Benchmarking Organic Micropollutants in Wastewater, Recycled Water and Drinking Water with In Vitro Bioassays, Beate I. Escher, Mayumi Allinson, Rolf Altenburger, Peter A. Bain, Patrick Balaguer, Wibke Busch, Jordan Crago, Nancy D. Denslow, Elke Dopp, Klara Hilscherova, Andrew R. Humpage, Anu Kumar, Marina Grimaldi, B. Sumith Jayasinghe, Barbora Jarosova, Ai Jia, Sergei Makarov, Keith A. Maruya, Alex Medvedev, Alvine C. Mehinto, Jamie E. Mendez, Anita Poulsen, Erik Prochazka, Jessica Richard, Andrea Schifferli, Daniel Schlenk, Stefan Scholz, Fujio Shiraishi, Shane Snyder, Guanyong Su, Janet Y. M. Tang, Bart van der Burg, Sander C. van der Linden, Inge Werner, Sandy D. Westerheid, Chris K. C. Wong, Min Yang, Bonnie H. Y. Yeung, Xiaowei Zhang, Frederic D. L. Leusch
Molecular Biosciences Faculty Publications

The Lone S41 Family C-terminal Processing Protease in Staphylococcus aureus is Localized to the Cell Wall and Contributes to Virulence, Ronan K. Carroll, Frances E. Rivera, Courtney K. Cavaco, Grant M. Johnson, David Martin, Lindsey N. Shaw
Molecular Biosciences Faculty Publications

Quantitative Proteomic Methodology Use and Development to Characterize Ethanol Modulation of Microglial Function, Harris Benjamin Bell-Temin
USF Tampa Graduate Theses and Dissertations

The Role of Serum Proteins in Staphylococcus aureus Adhesion to Ethylene Glycol Coated Surfaces, Swen Schuster, Wenqi Yu, Mulugeta Nega, Ya-Yun Chu, Stefan Zorn, Fajun Zhang, Friedrich Götz, Frank Schreiber
Molecular Biosciences Faculty Publications

D-beta-hydroxybutyrate Extends Lifespan in C. elegans, Clare Edwards, John Canfield, Neil Copes, Muhammad Rehan, David Lipps, Patrick C. Bradshaw
Molecular Biosciences Faculty Publications

Impact of the K24N Mutation on the Transactivation Domain of P53 and Its Binding to Murine Double-minute Clone 2, Yingqian Ada Zhan, Hongwei Wu, Anne T. Powell, Gary W. Daughdrill, F. Marty Ytreberg
Molecular Biosciences Faculty Publications

Phosphorylation of Histone Deacetylase 6 within its C-terminal Region by Extracellular Signal Regulated Kinase 1, Kendra Allana Williams
USF Tampa Graduate Theses and Dissertations

Epigenetic Modifiers to Augment the Immunogenicity of Chronic Lymphocytic Leukemia, Jason A. Dubovsky
USF Tampa Graduate Theses and Dissertations

Functional and mutational analysis of human RecQ-Like DNA helicases in Saccharomyces cerevisiae, Hamed Mirzaei-Souderjani
USF Tampa Graduate Theses and Dissertations

Drug Resistance Mechanisms to Gamma-secretase Inhibitors in Human Colon Cancer Cells, Cindy R. Timme
USF Tampa Graduate Theses and Dissertations

SIRT1 Regulation of the Heat Shock Response in an HSF1-Dependent Manner and the Impact of Caloric Restriction, Rachel Rene Raynes
USF Tampa Graduate Theses and Dissertations

Regulation of the Tumor Suppresser p53 and Survivin by Ras and Ral GTPases:Implications for Malignant Transformation, Awet G. Tecleab
USF Tampa Graduate Theses and Dissertations

Identification of Proteins at Active, Stalled, and Collapsed Replication Forks Using Isolation of Proteins on Nascent DNA (iPOND) Coupled with Mass Spectrometry, Bianca M. Sirbu, W. Hayes McDonald, Huzefa Dungrawala, Akosua Badu-Nkansah, Gina M. Kavanaugh, Yaoyi Chen, David L. Tabb, David Cortez
Molecular Biosciences Faculty Publications

RcsB Determines the Locus of Enterocyte Effacement (LEE) Expression and Adherence Phenotype of Escherichia coli O157 : H7 Spinach Outbreak Strain TW14359 and Coordinates Bicarbonate-dependent LEE Activation with Repression of Motility, Jason K. Morgan, Khoury W. Vendura, Stanley M. Stevens Jr., James T. Riordan
Molecular Biosciences Faculty Publications

A Transient α-helical Molecular Recognition Element in the Disordered N-terminus of the Sgs1 Helicase is Critical for Chromosome Stability and Binding of Top3/Rmi1, Jessica A. Kennedy, Gary W. Daughdrill, Kristina H. Schmidt
Molecular Biosciences Faculty Publications

Extracellular Proteases are Key Mediators of Staphylococcus Aureus Virulence via the Global Modulation of Virulence-determinant Stability, Stacey L. Kolar, J. Antonio Ibarra, Frances E. Rivera, Joe M. Mootz, Jessica E. Davenport, Stanley M. Stevens Jr., Alexander R. Horswill, Lindsey N. Shaw
Molecular Biosciences Faculty Publications

A Growing Role for Hypertrophy in Senescence, Jill Wright, Huzefa Dungrawala, Robert K. Bright, Brandt L. Schneider
Molecular Biosciences Faculty Publications

The Role of Argininosuccinate Synthase Serine 328 Phosphorylation in Nitric Oxide Production, Ricci Haines
USF Tampa Graduate Theses and Dissertations

SILAC-based Proteomic Analysis to Investigate the Impact of Amyloid Precursor Protein Expression in Neuronal-like B103 Cells, Dale Chaput, Lisa Hornbeck Kirouac, Harris Bell-Temin, Stanley M. Stevens Jr., Jaya Padmanabhan
Molecular Biosciences Faculty Publications

Lenalidomide targets the T-cell co-stimulatory pathway to mediate immune modulation, Jessica Marie Mcdaniel
USF Tampa Graduate Theses and Dissertations

WIPI-1 Positive Autophagosome-like Vesicles Entrap Pathogenic Staphylococcus aureus for Lysosomal Degradation, Mario Mauthe, Wenqi Yu, Oleg Krut, Martin Krönke, Friedrich Götz, Horst Robenek, Tassula Proikas-Cezanne
Molecular Biosciences Faculty Publications

The Two-Component Signal Transduction System ArlRS Regulates Staphylococcus Epidermidis Biofilm Formation in an Ica-Dependent Manner, Yang Wu, Jiaxue Wang, Tao Xu, Jingran Liu, Wenqi Yu, Qiang Lou, Tao Zhu, Nianan He, Haijing Ben, Jian Hu, Friedrich Götz, Di Qu
Molecular Biosciences Faculty Publications

Cell Wall Antibiotics Provoke Accumulation of Anchored MCherry in the Cross Wall of Staphylococcus aureus, Wenqi Yu, Friedrich Götz
Molecular Biosciences Faculty Publications

Identification of New Cell Size Control Genes in S. Cerevisiae, Huzefa Dungrawala, Hui Hua, Jill Wright, Lesley Abraham, Thivakorn Kasemsri, Anthony McDowell, Jessica Stilwell, Brandt L. Schneider
Molecular Biosciences Faculty Publications

Transcranial Electromagnetic Treatment Against Alzheimer's Disease: Why it has the Potential to Trump Alzheimer's Disease Drug Development, Gary W. Arendash
Molecular Biosciences Faculty Publications

An IMS/ATP Assay for the Detection of Mycobacterium tuberculosis in Urine, Dawn M. Hunter, Daniel V. Lim
Molecular Biosciences Faculty Publications

The Role of Tumor Suppressors, SHIP and Rb, in Immune Suppressive Cells, Michelle Marie Collazo Ruiz
USF Tampa Graduate Theses and Dissertations

Identification of Novel STAT3 Target Genes Associated with Oncogenesis, Rachel Haviland
USF Tampa Graduate Theses and Dissertations

Role of Protein Kinase C-iota in Glioblastoma, Shraddha R. Desai
USF Tampa Graduate Theses and Dissertations

Inhibition of p53 DNA binding function by the MDM2 acidic domain, Brittany Lynne Cross
USF Tampa Graduate Theses and Dissertations

Role of Protein Kinase C-iota in Neuroblastoma and the Effect of ICA-1, a Novel Protein Kinase C-iota Inhibitor on the Proliferation and Apoptosis of Neuroblastoma Cells, Prajit P. Pillai
USF Tampa Graduate Theses and Dissertations

Regulation of Cell Adhesion Strength by Spatial Organization of Focal Adhesions, Kranthi Kumar Elineni
USF Tampa Graduate Theses and Dissertations

FASTA Barcodes: a Simple Method for the Identification of Yeast ORF Deletions, K. Wyatt McMahon, Arkadi Manukyan, Huzefa Dungrawala, Micah Montgomery, Brian Nordstrom, Jill Wright, Lesley Abraham, Brandt L. Schneider
Molecular Biosciences Faculty Publications

Cell Size and Growth Rate are Major Determinants of Replicative Lifespan, Jingye Yang, Huzefa Dungrawala, Hui Hua, Arkadi Manukyan, Lesley Abraham, Wesley Lane, Holly Mead, Jill Wright, Brandt L. Schneider
Molecular Biosciences Faculty Publications

Synchronization of Yeast, Arkadi Manukyan, Lesley Abraham, Huzefa Dungrawala, Brandt L. Schneider
Molecular Biosciences Faculty Publications

The Roles of Elevated Bcl-2 in Ovarian Cancer, Nicole Shree Anderson
USF Tampa Graduate Theses and Dissertations

The Human in 3D: Advanced Morphometric Analysis of High-Resolution Anatomically Accurate Computed Models, Summer J. Decker
USF Tampa Graduate Theses and Dissertations

Molecular Mechanism of AGC Kinases in Human Malignant, Shaokun Shu
USF Tampa Graduate Theses and Dissertations

The Biogeochemistry of Submerged Coastal Karst Features in West Central Florida, Keith Michael Garman
USF Tampa Graduate Theses and Dissertations

Animal Models of Alzheimer's Disease, Gemma Casadesus, Gary Arendash, Frank Laferla, Mike McDonald
Molecular Biosciences Faculty Publications

Role of Staphylococcal Wall Teichoic Acid in Targeting the Major Autolysin Atl, Martin Schlag, Raja Biswas, Bernhard Krismer, Thomas Kohler, Sebastian Zoll, Wenqi Yu, Heinz Schwarz, Andreas Peschel, Friedrich Götz
Molecular Biosciences Faculty Publications

Contribution of SMC (Structural Maintenance of Chromosomes) and SpoIIIe to Chromosome Segregation in Staphylococci, Wenqi Yu, Silvia Herbert, Peter L. Graumann, Friedrich Götz
Molecular Biosciences Faculty Publications

Characterization of Peptide Deformylase Homologues from Staphylococcus epidermidis, Penghui Lin, Tiancen Hu, Jian Hu, Wenqi Yu, Cong Han, Jian Zhang, Guangrong Qin, Kunqian Yu, Friedrich Götz, Xu Shen, Hualiang Jiang, Di Qu
Molecular Biosciences Faculty Publications

Gene Regulation: Global Transcription Rates Scale with Size, Huzefa Dungrawala, Arkadi Manukyan, Brandt L. Schneider
Molecular Biosciences Faculty Publications

Changes in Benthic Macrofauna Associated with a Shallow-Water Hydrothermal Vent Gradient in Papua New Guinea, David J. Karlen, Roy E. Price, Thomas Pichler, James R. Garey
Molecular Biosciences Faculty Publications